DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and DND1

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_197045.1 Gene:DND1 / 831393 AraportID:AT5G15410 Length:726 Species:Arabidopsis thaliana


Alignment Length:652 Identity:128/652 - (19%)
Similarity:224/652 - (34%) Gaps:197/652 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 RSTGRGSQDNTLAGGGATSLAMGGHNQYGGNYCNGTDRYPRSRS------QQQG----HHNAAQQ 484
            ::||.....|....||.:|             .:|:|..|...|      .|.|    |..:..|
plant    22 QTTGIDENSNLQINGGDSS-------------SSGSDETPVLSSVECYACTQVGVPAFHSTSCDQ 73

  Fly   485 AHHPYQLQHSASTVSHHPHAHGPPSQGGPGGPGPPHGGHPHHPHHGGAGSGGGSGPGSHGGQPHH 549
            ||.|                                        ...|.:|....|...|..|: 
plant    74 AHAP----------------------------------------EWRASAGSSLVPIQEGSVPN- 97

  Fly   550 QKPRRTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMA----------FLYNFWVIIYRFAF 604
              |.||..:|::.....     |.||..:....|:..:.:|          |.|..         
plant    98 --PARTRFRRLKGPFGE-----VLDPRSKRVQRWNRALLLARGMALAVDPLFFYAL--------- 146

  Fly   605 QEINRRT-----------IAIWFCLDYLSDFLYLIDILFHFRTGYLED-------GVLQTDALKL 651
             .|.|.|           .|:...|....|.::|..:...||..|:..       |.|..|...:
plant   147 -SIGRTTGPACLYMDGAFAAVVTVLRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAI 210

  Fly   652 RTHYMNS-TIFYIDCLCLLPLDFLYLSIGFNSILRSFR----------------LVKIYRFWAFM 699
            .:||..| |.|:.|.:.:||:......:....::|..:                |.|||.....|
plant   211 ASHYARSLTGFWFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLM 275

  Fly   700 DRTERHTNYPNLFR------STALIHYLLVIFHWNGCLY-------------------------- 732
            .|.::.|.|  :|.      :..||.|.:......||.|                          
plant   276 RRMQKVTGY--IFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLSLA 338

  Fly   733 --------------------------HIIHK-----NNG---FGSRNWVYHDSESADVVKQYLQS 763
                                      .:::|     :||   :|...|......|..:..:.|..
plant   339 CKEEVCYQFVSPTSTVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALPVISSNSLAVKILYP 403

  Fly   764 YYWCTLALTTIGDLPKPRSKG-EYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDG 827
            .:|..:.|:|..:..:|.|.. |.:|.|:.:|.||:||..::|::...:.:|.|.:::.|.:...
plant   404 IFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQIRCRD 468

  Fly   828 VKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQ 892
            ::.:|:.|::|:.|:.:|.::....|......||...:..||..|:.:|...:..|.:.:|.:|:
plant   469 MEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDIKRYLCFDLINKVPLFR 533

  Fly   893 NTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMA--SLKAGSYF 955
            ..:...|..:..|.:|.:||..:.|.|:|:..:.|..:.|||::.:....|.|:|  :|:.|.|.
plant   534 GMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSKGVLATSTLEPGGYL 598

  Fly   956 GE 957
            |:
plant   599 GD 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 64/349 (18%)
CAP_ED 890..1004 CDD:237999 20/70 (29%)
DUF4655 1084..>1154 CDD:317882
DND1NP_197045.1 PLN03192 <388..>600 CDD:215625 52/211 (25%)
CAP_ED 531..641 CDD:237999 20/70 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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