DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC9

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001329900.1 Gene:CNGC9 / 829179 AraportID:AT4G30560 Length:733 Species:Arabidopsis thaliana


Alignment Length:559 Identity:137/559 - (24%)
Similarity:224/559 - (40%) Gaps:140/559 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 GPPHGGHPHHPHHGGAGSGGGSG---PGSHGGQPHHQKPRRTASQRIRAATAARKLHF----VFD 574
            ||..||       |..|:...||   .|...|........|:....:..|.....|..    :||
plant    48 GPTRGG-------GAQGNNVSSGSFKKGFRKGSKGLWSIGRSIGLGVSRAVFPEDLKVSEKKIFD 105

  Fly   575 PAGR---LC---YYWSMVVSMA----FLYNFWVIIYRFAFQE-------INRRTIAIWFCLDYLS 622
            |..:   ||   :..|.:::::    |||        ..|.:       |:|:...|...|..:.
plant   106 PQDKFLLLCNKLFVTSCILAVSVDPLFLY--------LPFVKDNEKCIGIDRKLAIIATTLRTVI 162

  Fly   623 DFLYLIDILFHFRTGYLED-------GVLQTDALKLRTHYMNSTIFYIDCLCLLPLD------FL 674
            |..||..:...|||.::..       |.|..|..::...|:.. .|.||.|.:|||.      ||
plant   163 DAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQ-YFIIDFLSVLPLPQIVVWRFL 226

  Fly   675 YLSIGFNSI-----LRSF-------RLVKIYRFWAFMDRTERHTNYPNLFRSTA----------- 716
            |:|.|.:.:     |||.       |.:::|...:.:.||      ..:|..||           
plant   227 YISKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRT------AGVFAETAWAGAAYYLLLY 285

  Fly   717 --------LIHYLLVIFHWNGCLYHI-------IHKNNGF-------GSRNW------------- 746
                    .|.|||.:..:|||...:       .|:|..|       |...|             
plant   286 MLASHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCP 350

  Fly   747 ------------VYHDSESADVV--KQYLQSYYWC----TLALTTIGD-LPKPRSKGEYVFVILQ 792
                        :|..:.|:.:|  |.::..|::|    ...|:|:|. |......||.:|.|..
plant   351 VNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSIAL 415

  Fly   793 LLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQK 857
            .:.||:|||.::|::...:.|::...:|.:.|....:.:|..|.:|..|:.:|.::..|.||..:
plant   416 AIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETR 480

  Fly   858 CSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGE 922
            ..|||..|..||..|:.:|..::.|..::||.:|:|.:...|..:..||:|.|::...|:.|:|:
plant   481 GVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGD 545

  Fly   923 VGKEMYIVNRGRLQ-VVADNGKTVM---ASLKAGSYFGE 957
            ...||..:.||||: |..|.|::..   :.||.|.:.||
plant   546 PVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 74/338 (22%)
CAP_ED 890..1004 CDD:237999 24/72 (33%)
DUF4655 1084..>1154 CDD:317882
CNGC9NP_001329900.1 PLN03192 161..>584 CDD:215625 108/429 (25%)
CAP_ED 513..644 CDD:237999 24/72 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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