DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC17

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_194765.2 Gene:CNGC17 / 829159 AraportID:AT4G30360 Length:720 Species:Arabidopsis thaliana


Alignment Length:651 Identity:144/651 - (22%)
Similarity:260/651 - (39%) Gaps:166/651 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 VFDPAGRLCYYWSMVVSMAF--------LYNFWVII-----YRFAFQEINRRTIAIWFCLDYLSD 623
            :.||...:...|:.|..::.        ||.|...|     |..|..:.:...:..:|  ..::|
plant    71 ILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGGDKNYPCARTDTSLSILVTFF--RTIAD 133

  Fly   624 FLYLIDILFHFRTGYLED---------GVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYL--- 676
            ..||:.|...||||::..         |.|..|...:...|:.|. |.||.:..|||..:.:   
plant   134 LFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKSD-FIIDLIATLPLPQIVIWFV 197

  Fly   677 -----SIGF----NSILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTA--------LIH----- 719
                 |..|    |:|.....|..|.||:..:..:.:......:...||        |::     
plant   198 ISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASH 262

  Fly   720 ------YLLVIFHWNGC---------------LYHI----IHKNNGF------------GSRN-- 745
                  |:|.:..:..|               ||::    ::.||..            .:||  
plant   263 VLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDCDSMYDNNQMTWANVTKVFKLCDARNGE 327

  Fly   746 ---WVYHDSESADVV-KQYLQSYYWC----TLALTTIG-DLPKPRSKGEYVFVILQLLFGLMLFA 801
               .::.::.:.:|| .|:.:.|::|    ...|::.| :|......||..|.:|..:|||:|||
plant   328 FKYGIFGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLSTTMFMGETTFAVLIAIFGLVLFA 392

  Fly   802 TVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVS 866
            .::|::...:.|::...:|::.|....:.:||.|::|..|:.:|.::..|.||..:..|||..:.
plant   393 HLIGNMQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQ 457

  Fly   867 CLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVN 931
            .||..|:.:|..::.||.::||..|...:...|..:..||...|.:.|.|:.|:|::..||..:.
plant   458 SLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFII 522

  Fly   932 RGRLQVVADNG------KTVMASLKAGSYFGE---------ISILNMGTAGNRRTASVRSVGYSD 981
            ||||:....||      .:::  |:.|.:.||         .|.||:.::    |.:||::...:
plant   523 RGRLESSTTNGGRTGFFNSII--LRPGDFCGEELLSWALLPKSTLNLPSS----TRTVRALVEVE 581

  Fly   982 LFVLSKKDMWDVLKEYPAARVRLESIAVKRLE-----------------------KYKKAPLEKV 1023
            .|.|..:|:..|..::.    ||.|   |:|:                       :||:..:|. 
plant   582 AFALRAEDLKFVANQFR----RLHS---KKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMEN- 638

  Fly  1024 KYFNVVAMGRCQSTPGLV---------ESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQ 1079
               |:.|:...::..|.|         |.|    :||........|...|.....|..::..|:|
plant   639 ---NLTAIESMENEEGEVGEELVVVEEEEC----VEESPRTKMNLGVMVLASRFAANTRRGVAAQ 696

  Fly  1080 Q 1080
            :
plant   697 R 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 68/332 (20%)
CAP_ED 890..1004 CDD:237999 31/128 (24%)
DUF4655 1084..>1154 CDD:317882
CNGC17NP_194765.2 PLN03192 131..>490 CDD:215625 82/359 (23%)
CAP_ED 481..612 CDD:237999 36/143 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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