DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC16

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_190384.1 Gene:CNGC16 / 823956 AraportID:AT3G48010 Length:705 Species:Arabidopsis thaliana


Alignment Length:588 Identity:129/588 - (21%)
Similarity:230/588 - (39%) Gaps:139/588 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 HGGQPHHQKPRRTASQRIRAATAARKLHFVFDPAGRLCYYWS--------MVVSMAFLYNFWVII 599
            |...|::|: ||:...::|..|        .||.|.|...|:        :.:.:..||.:..|:
plant    24 HHNDPNNQR-RRSIFSKLRDKT--------LDPGGDLITRWNHIFLITCLLALFLDPLYFYLPIV 79

  Fly   600 YR-FAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYLED-------GVLQTDALKLRTHYM 656
            .. .|...|:.|......|...|:|..:||.||..|:|.::..       |.|..|..::...|:
plant    80 QAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYL 144

  Fly   657 NSTIFYIDCLCLLPL-------------DFLYLSIGFNSILRSFRLVKIYRFWAFMDRTERHTNY 708
            .|. |.||....|||             :|.|.:...:::.....:..:.||...:....|....
plant   145 KSE-FVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKA 208

  Fly   709 PNLFRSTA-------LIHYLLVIFHWNGCLYHI--------------IHKNNGF----------- 741
            ..:...||       ||.|||| .|..|.::::              |.:.|..           
plant   209 TGVAAKTAWSGAAYNLILYLLV-SHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLD 272

  Fly   742 -------GSRNW-----------------------VYHDSESADVVKQ-YLQSYYWC-------- 767
                   |.:.|                       ::.|:.:.||... :...|::|        
plant   273 CGSLHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNL 337

  Fly   768 -----TLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDG 827
                 :||.:|:        ..|.:|.....:.||:.|:.::|:|.|.:.|.:|...|::.:...
plant   338 SSYGQSLAASTL--------SSETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRD 394

  Fly   828 VKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQ 892
            .:.:||.|::|:.||.:|.::..|.|||.:..|||..:..||..|:.:|..::.|..::||..|.
plant   395 TEEWMRHRQLPDELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFA 459

  Fly   893 NTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQ-VVADNGKTVM---ASLKAGS 953
            ..:...|..:..||.|.|.:...|:.|:|:...||..:.||::: ...|.|::..   .:|:.|.
plant   460 QMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGD 524

  Fly   954 YFGEISILNMGTAGN------RRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRL 1012
            :.|| .:|......|      ..|.:||::...:.|.|..:|:..|..::.    ||.|..::..
plant   525 FCGE-ELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFR----RLHSKKLQHA 584

  Fly  1013 EKY 1015
            .:|
plant   585 FRY 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 64/342 (19%)
CAP_ED 890..1004 CDD:237999 28/123 (23%)
DUF4655 1084..>1154 CDD:317882
CNGC16NP_190384.1 Ion_trans 94..386 CDD:278921 57/301 (19%)
Crp 451..>586 CDD:223736 33/139 (24%)
CAP_ED 457..588 CDD:237999 32/136 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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