DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGC19

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_188396.2 Gene:CNGC19 / 821036 AraportID:AT3G17690 Length:729 Species:Arabidopsis thaliana


Alignment Length:631 Identity:133/631 - (21%)
Similarity:232/631 - (36%) Gaps:169/631 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 PGSHGGQPHHQKPRRTASQRIR--------------AATAARKLHFVFDPAGRLCYYWSMVVSMA 590
            |..:..|.......|.::.|.|              |::..|.|..:.:|..:....|:.|::.:
plant   112 PSYYNRQAAQLHTSRVSASRFRTVLYGDARGWAKRFASSVRRCLPGIMNPHSKFVQVWTRVLAFS 176

  Fly   591 FLYNFWV---IIYRFAFQEINR------RTIAIWFCLDYLSDFLYLIDILFHFRTGYLED----- 641
            .|...::   ..:....|:.|:      |...:...|..::|.::.|:||..||..|:..     
plant   177 SLVAIFIDPLFFFLLLIQQDNKCIAIDWRATKVLVSLRSITDLIFFINILLQFRLAYVAPESRIV 241

  Fly   642 --GVLQTDALKLRTHYMNSTIFYIDCLCLLP------LDFLYLSIGF------NSILRS---FRL 689
              |.|.....|:..||.... |.:|...:.|      |..:.|.:|.      ..|||:   |:.
plant   242 GAGQLVDHPRKIARHYFRGK-FLLDMFIVFPIPQIMILRIIPLHLGTRREESEKQILRATVLFQY 305

  Fly   690 V-KIYRF-----------------WA--------FM----------------------------D 700
            : |:||.                 ||        ||                            .
plant   306 IPKLYRLLPLLAGQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKKCMLNAWNIS 370

  Fly   701 RTERHT------------NYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVYHDSES 753
            ..||..            :..:|:|..|.::   ..|..||..|.|..|         ..:.:..
plant   371 ADERRNLIDCARGSYASKSQRDLWRDNASVN---ACFQENGYTYGIYLK---------AVNLTNE 423

  Fly   754 ADVVKQYLQSYYWCTLALTTI-GDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAA 817
            :....::..|.||....::|: |:|....|.||..|.:..:..||:|||.::|::.|.:.|:...
plant   424 SSFFTRFSYSLYWGFQQISTLAGNLSPSYSVGEVFFTMGIIGLGLLLFARLIGNMHNFLQSLDRR 488

  Fly   818 RKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHL 882
            |.|...:...|:.:|..||:|..::.:|.:...|.|...:..:||.....:||.|:.:  |..||
plant   489 RMEMMLRKRDVEQWMSHRRLPEDIRKRVREVERYTWAATRGVNEELLFENMPDDLQRD--IRRHL 551

  Fly   883 -DTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYIC-RKGEVGKEMYIVNRGRLQVVADNGKTV 945
             ..||:|.||...:...|..:..||:...:.....:. .:|.|.|.::|| ||.::.:.::|..:
plant   552 FKFLKKVRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIV-RGEMESIGEDGSVL 615

  Fly   946 MASLKAGSYFGE------ISILN----------MGTAGNRRTASVRSVGYSDLFVLSKKDMWDVL 994
              .|..|...||      :|.:|          .|...||   :||.|...:.|.||..|:.||.
plant   616 --PLSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNR---NVRCVTNVEAFSLSVADLEDVT 675

  Fly   995 K-----------------EYPAARVRLESIAVKRLEKYKKAPLEKV 1023
            .                 |.|..|:| .::.::...:|:|..|:::
plant   676 SLFSRFLRSHRVQGAIRYESPYWRLR-AAMQIQVAWRYRKRQLQRL 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 65/335 (19%)
CAP_ED 890..1004 CDD:237999 34/147 (23%)
DUF4655 1084..>1154 CDD:317882
CNGC19NP_188396.2 PLN03192 216..>625 CDD:215625 94/426 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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