DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and CNGC15

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_180393.1 Gene:CNGC15 / 817372 AraportID:AT2G28260 Length:678 Species:Arabidopsis thaliana


Alignment Length:538 Identity:116/538 - (21%)
Similarity:205/538 - (38%) Gaps:130/538 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 VFDPAGRLCYYWSMVVSMAFLYNFWV--------IIYRFAFQEINRRTIAIWFCLDYLSDFLYLI 628
            :.||.|:....|:.:..:|.|.:.:|        ::...|...|..|...:...:..|:|..|:.
plant    68 ILDPRGQTIRRWNKIFLIACLVSLFVDPLFFFLPVMRNEACITIGVRLEVVLTLIRSLADAFYIA 132

  Fly   629 DILFHFRTGYLED-------GVLQTDALKLRTHYMNSTIFYIDCLCLLPL--------------- 671
            .||..|||.|:..       |.|..|:.|:...|::.: |:|..:..|||               
plant   133 QILIRFRTAYIAPPSRVFGRGELVIDSRKIAWRYLHKS-FWIHLVAALPLPQVLIWIIIPNLRGS 196

  Fly   672 ------DFLYLSIGFNSILRSFRLVKIYR------------FWAFMDRTERHTNYPNLFRSTALI 718
                  :.|...|.|..:.|.|.:..:.|            .||       ...| ||.......
plant   197 PMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWA-------GAAY-NLMLYMLAS 253

  Fly   719 H------YLLVIFHWNGCLYHIIH--------------------KNNGFGSRNW----------- 746
            |      |||.:.....|..|..:                    :|:.|   .|           
plant   254 HVLGACWYLLAVERQEACWRHACNIEKQICQYRFFECRRLEDPQRNSWF---EWSNITTICKPAS 315

  Fly   747 ------VYHDSESADV-----VKQYLQSYYWCTLALTTIG-DLPKPRSKGEYVFVILQLLFGLML 799
                  ::.|:.::.|     :.:|....:|....|:::| :|......||.:|.|:....||:|
plant   316 KFYEFGIFGDAVTSTVTSSKFINKYFYCLWWGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVL 380

  Fly   800 FATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERA 864
            ||.::|::...:.|.:...:|::.:....:.:|..|::|..|:..|.|:..|.||..:..|||..
plant   381 FALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEAL 445

  Fly   865 VSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYI 929
            :..||..|:.:|..::..|.::||.:|...:...|..:..||:|.|.:.|.::.|:|:...||..
plant   446 LISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLF 510

  Fly   930 VNRGRLQVVADNGKTV----MASLKAGSYFGE-----------ISILNMGTAGNRRTASVRSVGY 979
            :.||.|.....||...    ...:..|.:.||           :.||...|    ||  |:::..
plant   511 IIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSST----RT--VKAICE 569

  Fly   980 SDLFVLSKKDMWDVLKEY 997
            .:.|.|..:|:..|..::
plant   570 VEAFALKAEDLQFVASQF 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 64/334 (19%)
CAP_ED 890..1004 CDD:237999 29/123 (24%)
DUF4655 1084..>1154 CDD:317882
CNGC15NP_180393.1 PLN03192 127..>489 CDD:215625 80/373 (21%)
CAP_ED 471..602 CDD:237999 29/123 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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