Protein Alignment CG42260 and Cngb3

DIOPT Version :10

• Sequence 1: NP_001356969.1
• Gene: CG42260 / 37614
• FlyBaseID: FBgn0259145
• Length: 1269
• Species: Drosophila melanogaster
• Sequence 2: NP_001258167.1
• Gene: Cngb3 / 500418
• RGDID: 1565364
• Length: 690
• Species: Rattus norvegicus
• Alignment Length: 489
• Identity: 157/489 - (32%)
• Similarity: 264/489 - (53%)
• Gaps: 27/489 - (5%)

  Fly   538 SGPGSHGGQPHHQKPRRTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRF 602
            |.|..|    ||:..|....:.:|:....|.:....|   |:...|.::|::|:.:|.|::..|.
  Rat   171 SKPKEH----HHKLQRVPVKEYLRSMRLPRSIDSYTD---RIYLLWLLLVTIAYNWNCWLLPVRL 228

  Fly   603 AF--QEINRRTIAIWFCLDYLSDFLYLIDI-LFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYID 664
            .|  |..:.|.  .|...|.:.|.:||.|| |...|..::..|.:..|:.:|:.||.:||.|.:|
  Rat   229 VFPCQTPDNRN--YWIITDIICDIIYLGDILLIQPRLQFVRGGEIIVDSNELKRHYRSSTKFQMD 291

  Fly   665 CLCLLPLDFLYLSIGFNSILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNG 729
            ...|||.:.||:..|.|.|.|:.|::|...|:.|....|...:...::|......|||.:.|.|.
  Rat   292 VASLLPFEVLYIFFGVNPIFRTNRILKYTSFFEFNHHLESIMDRAYVYRIIRTTGYLLFLLHINA 356

  Fly   730 CLYHIIHKNNGFGSRNWVYHDSESADVVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLL 794
            |:|:......|.||..|||:...:     :||:.:||....|.|||.||:|::..|.||.:|...
  Rat   357 CVYYWASDYEGIGSTKWVYNGEGN-----KYLRCFYWAVRTLITIGGLPEPQTSFEIVFQLLNFF 416

  Fly   795 FGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCS 859
            .|:.:|::::|.:.:::.:.:|.:..|...:|.:..||....:|...|.:|..|.:|.|.:|:..
  Rat   417 SGVFVFSSLIGQMRDVIGAATANQNNFHVCMDHIIAYMNKYSIPQSTQHRVRTWLEYTWHSQRIL 481

  Fly   860 DEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVG 924
            ||...:..||..::..:||:::.:.:.:||:|:..:...:.:|:|||:..::.|||::|:|||:|
  Rat   482 DESNLLETLPTAMQLSVAIDINFNIIDKVELFKGCDTQMIYDLLLRLKSTIYLPGDFVCKKGEIG 546

  Fly   925 KEMYIVNRGRLQVV-ADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYSDLFVLSKK 988
            |||||:..|.:||: ..:|..|:.:||||:.|||||:|..| .||||||.|.:.|:::|..|.||
  Rat   547 KEMYIIKHGEVQVLGGPDGAQVLVTLKAGAVFGEISLLAKG-GGNRRTADVVAHGFANLLTLDKK 610

  Fly   989 DMWDVLKEYPAARVRLESIAVKRLEKYKKAPLEK 1022
            .:.::|..||.::        |.|.|..|..|.:
  Rat   611 TLQEILLHYPTSK--------KLLMKKAKVLLSQ 636

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42260	NP_001356969.1	Ion_trans	581..820	CDD:459842	74/241 (31%)
		CAP_ED	890..1004	CDD:237999	49/114 (43%)
Cngb3	NP_001258167.1	PLN03192	198..>584	CDD:215625	127/395 (32%)
		CAP_ED	512..620	CDD:237999	47/108 (44%)