DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cng-3

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001023194.1 Gene:cng-3 / 3565463 WormBaseID:WBGene00000563 Length:626 Species:Caenorhabditis elegans


Alignment Length:621 Identity:154/621 - (24%)
Similarity:262/621 - (42%) Gaps:123/621 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 SHGGQ--PH-HQKPRRTAS------------------QRIRAATAARKLHFVFDPAGRLCYYWSM 585
            :|..|  |: |::.||.:.                  ::.|||....:..|..|.:|.:.:.|:.
 Worm     3 THSAQKLPNLHERKRRMSKKPDDDDLIPQHFEYENQYEKWRAANPRIEYDFSVDESGYIYWIWTF 67

  Fly   586 VVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRTGYLEDGVLQTDALK 650
            .|....|||. :::...||:.|....|.....::...|.::|.||:......:.|||||.|...:
 Worm    68 FVVCGCLYNI-IVLSVLAFENIRYAYIEKILPINIAFDTVFLFDIILRSMLSFYEDGVLITSFSE 131

  Fly   651 LRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNSILRSFRLVKIYRFWAFMDRTERHTNYPNLFRST 715
            ...||::|..|.||.|.:.|.|:|.:.....:..|..|.:||||...|:.:     :|..|.:.|
 Worm   132 TWRHYVHSFYFAIDLLAIFPFDYLLIRKTSAAFCRLNRFLKIYRIANFIAQ-----SYGKLTQVT 191

  Fly   716 ALIHYL----LVIFHWNGCLYHIIHKNNGFGSRNWV----------------------------- 747
            ..:..:    .::||.|.|:::||..|:...|.:.|                             
 Worm   192 ISLSKIFTACFLLFHVNACVFYIISVNSDTSSWDGVNATFDDDEYLPWPYTPEKITDAYFVGCDG 256

  Fly   748 ---------YHDSESAD----------------------VVKQYLQSYYWCTLALTTIGDLPKPR 781
                     |:|....|                      ..|:|..|.||..:.:||:|:.|.|.
 Worm   257 RTDCYNPYFYYDEAREDHLVELYHFWRTDNRTHIYNFSQFTKEYTLSMYWSAMTMTTLGEQPAPN 321

  Fly   782 SKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVI 846
            :..:..|.|:..|.||:|||.::|.:.::|.:.:|.:..:|..:||:|.||..|.:...||.||:
 Worm   322 TSLQNAFEIVNTLAGLLLFAVIMGSIGDLVANANAVKTFWQTLMDGLKQYMTYRNLNERLQTKVL 386

  Fly   847 KWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLF 911
            |:.:|....:....|......||.||...:..::...:|.|..:|:.:|..||.::...|.|..|
 Worm   387 KYCEYEMAEETIMKEHEVRDELPAKLYGHVTTSIIGASLVRSPLFRASERSFLNDISQLLEPHYF 451

  Fly   912 SPGDYICRKGEVGKEMYIVNRGRL-QVVADNGKTVMASLKAGSYFGEISIL--NMGTAGNRRTAS 973
            .|||.:..||::...|:|:..|:: ::..||    ......|...|:::::  |.....||...:
 Worm   452 CPGDVVIEKGQLCSSMFIIVCGQMVEITEDN----EIDHFEGEILGDVNLIWFNNHLNHNRHQHN 512

  Fly   974 VRSVGYSDLFVLSKKDMWDVLKEY-PAARVRLESIAVKRLEKYKKAPLEKVKYFNVVAMGRCQST 1037
            |.|..:|.:.:||:.|.:.||..| |..:.||..:|. .|:: ::..|:..|        ||.|.
 Worm   513 VISSAFSQIHMLSRDDFFKVLSSYDPKLKRRLCDVAF-YLQR-QRGELDDKK--------RCLSE 567

  Fly  1038 PGLVES-CGRTSL-------------EEMWLPPATA 1059
            ...:|| ..|.::             ||.|...|||
 Worm   568 NEDIESNLKRLAIDTLELHDKMTEMEEEFWDFSATA 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 72/301 (24%)
CAP_ED 890..1004 CDD:237999 32/117 (27%)
DUF4655 1084..>1154 CDD:317882
cng-3NP_001023194.1 Ion_trans 64..>218 CDD:366146 45/159 (28%)
PLN03192 <290..>495 CDD:215625 60/208 (29%)
CAP_ED 430..544 CDD:237999 32/117 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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