DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42260 and CG4839

DIOPT Version :9

Sequence 1:	NP_001356969.1	Gene:	CG42260 / 37614	FlyBaseID:	FBgn0259145	Length:	1269	Species:	Drosophila melanogaster
Sequence 2:	NP_609349.1	Gene:	CG4839 / 34348	FlyBaseID:	FBgn0032187	Length:	1003	Species:	Drosophila melanogaster

Alignment Length:	224	Identity:	47/224 - (20%)
Similarity:	86/224 - (38%)	Gaps:	71/224 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   881 HLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVV---ADNG 942
            :|..|:.....|..:...|.::|..|:...:.....|.|:||:|.|.||:..|.:.:.   ....
  Fly   541 NLQFLRSAPFLQEFDQSLLLKVVDLLQRKFYETDSCIVREGELGNEFYIIRCGTVTIKKLDEQQQ 605

  Fly   943 KTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYSD-----LFVLSKKDMWDV------LKE 996
            :.::|:.|.|.||||.::||    .:.|.|||    |:|     :.:|.::.....      |:|
  Fly   606 EQIVANRKRGDYFGEQALLN----ADVRQASV----YADAPGTEVLMLDREAFISYLGTIKQLRE 662

  Fly   997 YPAAR------------------------VRLESIA------------------------VKRLE 1013
            .|:::                        ..|:.||                        :|::|
  Fly   663 KPSSQRNDTSGRSSTKSLEFDNEYSQVAISELKKIATLGCGAFGRVDLVAYNQQALALKIIKKIE 727

  Fly  1014 KYKKAPLEKVKYFNVVAMGRCQSTPGLVE 1042
            ..|:..:|.| |.....|.:|:.:|.:|:
  Fly   728 VVKQDQIEHV-YNEKNVMIKCRQSPFIVQ 755

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42260	NP_001356969.1	Ion_trans	581..819	CDD:334124
		CAP_ED	890..1004	CDD:237999	32/151 (21%)
		DUF4655	1084..>1154	CDD:317882
CG4839	NP_609349.1	Crp	428..577	CDD:223736	6/35 (17%)
		CAP_ED	431..539	CDD:237999
		Crp	544..>650	CDD:223736	30/113 (27%)
		CAP_ED	550..663	CDD:237999	30/120 (25%)
		S_TKc	695..951	CDD:214567	12/62 (19%)
		STKc_cGK	700..957	CDD:270724	10/57 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910