DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and Pkg21D

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_477213.1 Gene:Pkg21D / 33253 FlyBaseID:FBgn0000442 Length:768 Species:Drosophila melanogaster


Alignment Length:397 Identity:79/397 - (19%)
Similarity:143/397 - (36%) Gaps:129/397 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   754 ADVVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAAR 818
            |..|::.:.|.|            .|..:.||  |||.:...|..|:.:..|..|     |....
  Fly   191 ASQVRELVDSMY------------SKSIAAGE--FVIREGEVGAHLYVSAAGEFA-----VMQQG 236

  Fly   819 KEFQAKLDGVKTYMRMRRVPN---HLQVKVIKWFDYLWLTQK--------CSDEERAVSCLPDKL 872
            |... |:...|.:..:..:.|   ...::|:.....:|:..:        |:..:|         
  Fly   237 KVLD-KMGAGKAFGELAILYNCTRTASIRVLSEAARVWVLDRRVFQQIMMCTGLQR--------- 291

  Fly   873 KAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQV 937
             .|.::|.    |:.|.:..|.....|.::...|....::.|.||.|:|..|...:::::|.::|
  Fly   292 -IENSVNF----LRSVPLLMNLSEELLAKIADVLELEFYAAGTYIIRQGTAGDSFFLISQGNVRV 351

  Fly   938 V-----ADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASV------------------RSVGY 979
            .     ....:|.:.:|..|.||||.:::|    .::|||::                  |.:| 
  Fly   352 TQKLTPTSPEETELRTLSRGDYFGEQALIN----EDKRTANIIALSPGVECLTLDRDSFKRLIG- 411

  Fly   980 SDLFVLSKKDMWDVLKEYPAARVRLESIAVKRL-EKYKKAPLEKVKYFNVVAMGRCQSTPGLVES 1043
             ||..|.:||..|..::          :|:|:. |..:..|.|:::          |..|.|   
  Fly   412 -DLCELKEKDYGDESRK----------LAMKQAQESCRDEPKEQLQ----------QEFPDL--- 452

  Fly  1044 CGRTSLEEMWLPPATAGASS------LMHHHQ---------ALQQQHQASQQQPHRQESTQTSSQ 1093
             ..|.||.:    :|.|...      :..|||         .|:::|           ...|..:
  Fly   453 -KLTDLEVV----STLGIGGFGRVELVKAHHQDRVDIFALKCLKKRH-----------IVDTKQE 501

  Fly  1094 THGYSPR 1100
            .|.:|.|
  Fly   502 EHIFSER 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 15/64 (23%)
CAP_ED 890..1004 CDD:237999 30/136 (22%)
DUF4655 1084..>1154 CDD:317882 4/17 (24%)
Pkg21DNP_477213.1 Crp 183..386 CDD:223736 46/232 (20%)
CAP_ED 185..285 CDD:237999 21/113 (19%)
CAP_ED 304..419 CDD:237999 27/120 (23%)
Pkinase 457..717 CDD:278497 13/67 (19%)
STKc_cGK 463..724 CDD:270724 10/57 (18%)
S_TK_X 719..>760 CDD:214529
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.