DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and Kcnh8

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_659563.1 Gene:Kcnh8 / 246325 RGDID:2549 Length:1102 Species:Rattus norvegicus


Alignment Length:794 Identity:179/794 - (22%)
Similarity:320/794 - (40%) Gaps:168/794 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 LHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAF------QEINRRTIAIWFCLDYLSDFLYL 627
            |||....||     |..::.:|..|....:.|...|      ......|::     |...:.|::
  Rat   215 LHFSTFKAG-----WDWLILLATFYVAVTVPYNVCFIGNEDLSTTRSTTVS-----DIAVEILFI 269

  Fly   628 IDILFHFRTGYL-EDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-------SIL 684
            |||:.:|||.|: :.|.:..:|..:..||: :|.|.||.:..||.|.||   .||       .:|
  Rat   270 IDIILNFRTTYVSKSGQVIFEARSICIHYV-TTWFIIDLIAALPFDLLY---AFNVTVVSLVHLL 330

  Fly   685 RSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIF----HWNGCLYHIIHK-------- 737
            ::.||:::.|....:||..:|        ||.::..|:.:|    ||..|::::|.|        
  Rat   331 KTVRLLRLLRLLQKLDRYSQH--------STIVLTLLMSMFALLAHWMACIWYVIGKMEREDNSL 387

  Fly   738 ---------------------NNGFGSRNWVYHDSESADVVKQYLQSYYWCTLALTTIG-DLPKP 780
                                 ||..|          ...:...|:.:.|:...:||::| .....
  Rat   388 LKWEVGWLHELGKRLESPYYGNNTLG----------GPSIRSAYIAALYFTLSSLTSVGFGNVSA 442

  Fly   781 RSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKV 845
            .:..|.:|.|..:|.|.::.|.|.|:|..|:..:.:....:..:...:|.::|:..:|..|:.::
  Rat   443 NTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQLKQRM 507

  Fly   846 IKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVL 910
            :::|...|......|....:...||:|:::|.::::.:.| ::.:|:....|.|..|.|.::...
  Rat   508 LEYFQTTWSVNNGIDSNELLKDFPDELRSDITMHLNKEIL-QLSLFECASRGCLRSLSLHIKTSF 571

  Fly   911 FSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFG-EISILNMGTAGNRRTASV 974
            .:||:|:.|:|:..:.:|.|..|.::|:.|:  .|:|.|..|...| .:||.:.....|   |.|
  Rat   572 CAPGEYLLRQGDALQAIYFVCSGSMEVLKDS--MVLAILGKGDLIGANLSIKDQVIKTN---ADV 631

  Fly   975 RSVGYSDLFVLSKKDMWDVLKEYPA----------------ARVRLESIAVKRLEKYKKAPLEKV 1023
            :::.|.||..:..|.:::||..||.                .|...||..:.||......|..:.
  Rat   632 KALTYCDLQCIILKGLFEVLGLYPEYAHKFVEDIQHDLTYNLREGHESDVISRLSNKSTVPQAEP 696

  Fly  1024 KYFNVVAMGRCQSTPGLVESCGRTSLEE---MWLPPATAGASSLMHHHQALQQQHQASQQQPHRQ 1085
            |....:.    :..|.:||......:||   ..|.|.....||:.|                   
  Rat   697 KGNGSIK----KRLPSIVEDEEEEEVEEEETTSLSPIYTRGSSVSH------------------- 738

  Fly  1086 ESTQTSSQ-----------THGYSPRSYADRLARATDSPRS---VSPSAHGSEERPRSRT---TS 1133
             |.:|.|.           |.|..|.....|::.| :||::   ..|..||:.:....:.   :.
  Rat   739 -SKKTGSSKSYLGLSLKQLTSGTVPFHSPIRVSSA-NSPKTKQEADPPNHGTRKEKNLKVQLCSL 801

  Fly  1134 HHSIRPQSQPSHTGHICDSSSQLEC----YGAGVGGAGGGTTPLLGSHEV----LEDEIKRLRER 1190
            ..:..|:..|.....|.|.:|..|.    :|:.........:|.||..|:    |..:.:..:::
  Rat   802 GTAGTPELSPRIVDGIEDGNSSEETQTFDFGSEQIRPEPRISPSLGESEIGAAFLFIKAEETKQQ 866

  Fly  1191 LHTVESENQALNTKLSQQQWD-------LENRLA-EIEMQICGVSSTSSVDPENETEELERNRES 1247
            ::.:.||...|..::||...|       |||.|: :...|.|.:..| |:.|..|:.:   .|.|
  Rat   867 INKLNSEVTTLTQEVSQLGKDMRSIMQLLENILSPQQPSQFCSLHPT-SICPSRESFQ---TRVS 927

  Fly  1248 IIXHGSVLPHQAIG 1261
            .. |...|..||.|
  Rat   928 WSAHQPCLHLQANG 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 64/285 (22%)
CAP_ED 890..1004 CDD:237999 34/130 (26%)
DUF4655 1084..>1154 CDD:317882 17/86 (20%)
Kcnh8NP_659563.1 PAS_9 29..135 CDD:290162
PAS 42..133 CDD:238075
Ion_trans 239..481 CDD:278921 61/268 (23%)
Ion_trans_2 <421..475 CDD:285168 15/53 (28%)
Selectivity filter. /evidence=ECO:0000250 434..439 1/4 (25%)
Crp 548..707 CDD:223736 40/167 (24%)
CAP_ED 551..662 CDD:237999 33/115 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 683..744 16/84 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..793 8/31 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 818..845 4/26 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..983
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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