DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and Kcnh5

DIOPT Version :10

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_766393.2 Gene:Kcnh5 / 238271 MGIID:3584508 Length:988 Species:Mus musculus


Alignment Length:800 Identity:169/800 - (21%)
Similarity:310/800 - (38%) Gaps:184/800 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 LHFVFDPAGRLCYY---WSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDI 630
            ||:        |.:   |..|:.:...|...::.|..:| :..:..|| |..||.:.|.::|:||
Mouse   208 LHY--------CAFKTTWDWVILILTFYTAIMVPYNVSF-KTKQNNIA-WLVLDSVVDVIFLVDI 262

  Fly   631 LFHFRTGYL-EDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLD----FLYLSIGFNSILRSFRLV 690
            :.:|.|.:: ..|.:.:|...:|.:|: .|.|.||.|..||.|    |..:..|.:|:..|.::|
Mouse   263 VLNFHTTFVGPGGEVISDPKLIRMNYL-KTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVV 326

  Fly   691 KIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIF----HWNGCL------YHIIHK-NNGFGSR 744
            ::.|......:.:.:..|     ..|::..|:.:|    ||..|:      |.:|.: .|.....
Mouse   327 RLLRLGRVARKLDHYLEY-----GAAVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQID 386

  Fly   745 NWVY-------------------HDSESADVVKQYLQSYYWCTLALTTIG-DLPKPRSKGEYVFV 789
            :|:|                   ....|.|.:  |:.|.|:...:||||| ....|.:..|.:|.
Mouse   387 SWLYQLALSIGTPYRYNTSAGIWEGGPSKDSL--YVSSLYFTMTSLTTIGFGNIAPTTDVEKMFS 449

  Fly   790 ILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWL 854
            :..::.|.:|:||:.|:|..|...:.|....:...|:.|:.::::.:||..|..:|:.:....|.
Mouse   450 VAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWS 514

  Fly   855 TQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICR 919
            ..|..|.|:.:|..|..::|:|.::::.........|:....|.|..|.:..:.:..:|||.|..
Mouse   515 MSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYH 579

  Fly   920 KGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYSDLFV 984
            .||....:..|..|.|:|:.|  :.|:|.|..|..||:|.......|  ...|:||::.|.||.:
Mouse   580 AGESVDALCFVVSGSLEVIQD--EEVVAILGKGDVFGDIFWKETTLA--HACANVRALTYCDLHI 640

  Fly   985 LSKKDMWDVLKEYPA------------ARVRLESIAVKRLEKYKKAPLEKVKYFNVVAM------ 1031
            :.::.:..||..|.|            ..:| :.|..:::...||...|:::..|.|.:      
Mouse   641 IKREALLKVLDFYTAFANSFSRNLTLTCNLR-KRIIFRKISDVKKEEEERLRQKNEVTLSIPVDH 704

  Fly  1032 ------------------GRCQSTPG----LVES---------CGRTSLEEMWLPPATAGASSLM 1065
                              |..||.|.    .|||         .|.:.:....:.|.....:.:.
Mouse   705 PVRKLFQKFKQQKELRIQGSAQSDPERSQLQVESRPLQNGASITGTSVVTVSQITPIQTSLAYVK 769

  Fly  1066 HHHQALQQQHQASQQQPH---------------------------RQESTQTSSQTHGYSPRSYA 1103
            ......|....|.:.:|:                           :........:...::..:.|
Mouse   770 TSESLKQNNRDAMELKPNGGAEPKCLKVNSPIRMKNGNGKGWLRLKNNMGAQEEKKEDWNNVTKA 834

  Fly  1104 DRLARATDSPRSVSPSAHGSEERPRSRTTSHHSIRPQSQPSHTGHICDS---SSQLECYGAGVGG 1165
            :.:...::.|:. |.|.:...:.|..:|.|                |||   .|.|.     :..
Mouse   835 ESMGLLSEDPKG-SDSENSVTKNPLRKTDS----------------CDSGITKSDLR-----LDK 877

  Fly  1166 AGGGTTPLLGSHEVLEDEIKR-------------LRERLHTVESENQALNTKLSQQQWDLENRLA 1217
            ||...:||  .|...:.::|.             |:|..|.::.:.|.|:.:::.    ||.::|
Mouse   878 AGEARSPL--EHSPSQADVKHSFYPIPEQALQTTLQEVKHELKEDIQLLSCRMTA----LEKQVA 936

  Fly  1218 EIEMQIC--GVSSTSSVDPE 1235
            ||...:.  .|..|||..|:
Mouse   937 EILKLLSEKSVPQTSSPKPQ 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 67/277 (24%)
CAP_ED 890..1004 CDD:237999 33/125 (26%)
Kcnh5NP_766393.2 PAS_9 39..132 CDD:463873
PLN03192 217..>616 CDD:215625 102/410 (25%)
Selectivity filter. /evidence=ECO:0000250 432..437 3/4 (75%)
Crp 551..758 CDD:440428 48/211 (23%)
Calmodulin-binding. /evidence=ECO:0000255 704..715 0/10 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 721..741 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 838..893 16/78 (21%)
CAD (involved in subunit assembly). /evidence=ECO:0000250 909..948 10/42 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.