DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cng-2

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001343690.1 Gene:cng-2 / 190732 WormBaseID:WBGene00022295 Length:819 Species:Caenorhabditis elegans


Alignment Length:725 Identity:199/725 - (27%)
Similarity:313/725 - (43%) Gaps:163/725 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 RYPRSRSQQQGHHNAAQQAHHPYQLQHSASTVSHHPHAHGPPSQGGPGGPGPPHGGHPHHP---- 527
            ||.|:.|.:.....|.:.:.....:..::.:|........|.|..|...|.|.....||.|    
 Worm    27 RYLRALSAKNQERTANEHSSVDVAVTQASLSVPRPGILRLPSSDPGEEDPQPSTSSIPHRPSKWA 91

  Fly   528 ----------------------HH---------------GGAGSGGGSGPGSH------------ 543
                                  ||               ..|.:||...||..            
 Worm    92 TVREKSPQIIGGHAKEVTFQERHHKLDLNKSRSTSKNRRKSAQNGGAEDPGQKSFSDVVKTAMML 156

  Fly   544 ----GGQPHHQK---PRRTASQRIRAATAA------------------------------RKLHF 571
                ....|.::   |.|.|:......|||                              |||::
 Worm   157 RTWISAMEHDERESEPDRDATTTNAEITAADDRSILPSPPIFQQRQTGFTQIKDILTDKCRKLYY 221

  Fly   572 VF-DPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFR 635
            .: .......|||:.::|:..|||.:.::. |.|.:::......|..::...||.:|:|.|...|
 Worm   222 FYVTENSTFFYYWTAIISIGILYNMFAMVI-FIFDDVHFGYFNQWLYVNLFFDFCFLLDCLVGSR 285

  Fly   636 TGYLEDG--VLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-SILRSFRLVKIYRFWA 697
            ..::.:|  |.|||  |:..:|..|....:|.|||.|.|| ||.|... |::|:.||||.||.:.
 Worm   286 MTFVSEGNEVSQTD--KMFKNYRQSRRCKLDLLCLAPADF-YLFIDTKASLVRAIRLVKAYRLYE 347

  Fly   698 FMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHII--------HKNNGFG------------ 742
            |:..|:|.|::|:..:...|.....::||||.|:|.:.        ...|.||            
 Worm   348 FIMLTQRRTDFPHFMKILFLTSSCAILFHWNACVYFLFSLYQGLTEDDPNAFGFSYYKVFDPRFS 412

  Fly   743 ------SRNWVY-HDSESADV---------------------------VKQYLQSYYWCTLALTT 773
                  .::..| .|:|..|:                           .::|..:.||.:|.:|.
 Worm   413 ICDALYDQDCYYPEDTEVLDIRDERPHYMEDMYKFWDKKFNILQIGNFSREYSMTIYWSSLTITK 477

  Fly   774 IGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVP 838
            .|..|.|....:....|...|.|:::|||::|.|.::||.:|....:|:..:||:|.||:.|.|.
 Worm   478 CGQQPWPSKSSQNSLEIFDTLIGVLVFATIIGGVGSVVTQMSQNVNDFREMMDGIKFYMKYRGVQ 542

  Fly   839 NHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELV 903
            :.:|.:|:..|.||....:..|||..:|.||...:|.||.|:|.|||.:|.:|...:...|.|:|
 Worm   543 SAIQDRVLNCFLYLNSHNQLYDEEEILSLLPPFFQARIAANLHQDTLSKVSLFYKCDQRLLQEVV 607

  Fly   904 LRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNM--GTA 966
            :.::..::||.||:|||.|..|||:||.:|.|.|:.|:....:.|||.|..|||:||:.:  ...
 Worm   608 MLVKQQVYSPNDYLCRKNEKAKEMFIVKKGLLAVIDDDTGVELDSLKEGHTFGELSIVQVKGNIL 672

  Fly   967 GNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAPLEKVKYFNVVAM 1031
            |:||:.|:|||||||::||.:.|:..:|:|||..||||...|.:.|  :.:..||..:      :
 Worm   673 GDRRSVSLRSVGYSDVYVLHQDDVTRLLQEYPEERVRLMENARRML--HSRGLLETNE------L 729

  Fly  1032 GR-CQSTPGL 1040
            |. |::..||
 Worm   730 GEMCETDDGL 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 80/294 (27%)
CAP_ED 890..1004 CDD:237999 50/115 (43%)
DUF4655 1084..>1154 CDD:317882
cng-2NP_001343690.1 Ion_trans 232..>407 CDD:366146 57/178 (32%)
PLN03192 <457..>713 CDD:215625 99/255 (39%)
CAP_ED 594..711 CDD:237999 51/116 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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