DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and cng-1

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001122918.1 Gene:cng-1 / 180004 WormBaseID:WBGene00000562 Length:661 Species:Caenorhabditis elegans


Alignment Length:516 Identity:179/516 - (34%)
Similarity:274/516 - (53%) Gaps:78/516 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 LHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEIN---RRTIAIWFCLDYLSDFLYLIDI 630
            :.|..|......|.|:.:||:..|:.. |......||:::   |.|..    |:.|.|.:.::|:
 Worm    69 MSFTVDEHSNTFYLWTGLVSLVALHPL-VFTALSVFQDVHPFLRNTGP----LNLLLDLVNILDL 128

  Fly   631 LFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNSIL---RSFRLVKI 692
            :.|.|..|:|:||...:..||..|.:.||.|.:|.:.::|.:.|::   |....   |..||.|.
 Worm   129 IAHTRIEYVENGVAVKNLSKLMHHRLKSTFFILDVIAVVPAESLHI---FGDSFFWSRINRLTKC 190

  Fly   693 YRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGS---RNWVY------ 748
            ||.:.|..:|:..|..|:.|....||...:||||||||||..|.|...:.:   .:|::      
 Worm   191 YRLFDFSTQTDTRTTSPHAFGLFKLIFICVVIFHWNGCLYFYISKVYNYTTARLEHWIFSYDKII 255

  Fly   749 --------------------------HDSES----------------------ADVVKQYLQSYY 765
                                      |..|:                      |:..:||..|:|
 Worm   256 NPILATCVTDIPNHRDFCDTDDLLITHLPENEVQFTVTDYMTTWENKTTTIKFANFFRQYALSFY 320

  Fly   766 WCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKT 830
            |..|.|.|:|:.|.|.:..:..|.|...|.||::||.::|.|.|:|.:::..:.||:..|||.|.
 Worm   321 WSALTLVTLGEQPSPCTTFQNAFEIGDTLLGLVIFAVIVGDVGNMVVAINLRKSEFENVLDGCKR 385

  Fly   831 YMRMRRVPNHLQVKVIKWFDYLWLTQKCS-DEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNT 894
            :|..|:|||.|:.|.:::|.|:|...... |||.....||.:|..|||:.:|:||||:|::|::.
 Worm   386 FMVYRKVPNLLRKKAVEYFAYVWAHGGAQVDEEEIAEFLPPRLFGEIAVEIHMDTLKKVKLFESC 450

  Fly   895 EAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEIS 959
            :...|.||:|:|:..::||.||||:||:||.|||||..|.::||:::|:|:..:|.||..|||:|
 Worm   451 DPRLLYELILKLQLRVYSPMDYICKKGDVGTEMYIVKEGFVEVVSEDGQTIFVTLPAGFVFGELS 515

  Fly   960 ILNMGTAGNR----RTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYK 1016
            |||:  .||:    |||||||.|||||:||.|:|:|:.|.|||.|:..|....::.|||.|
 Worm   516 ILNI--PGNKNKNLRTASVRSKGYSDLYVLDKEDLWEALHEYPQAKDSLIQKGIQILEKDK 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 81/300 (27%)
CAP_ED 890..1004 CDD:237999 60/117 (51%)
DUF4655 1084..>1154 CDD:317882
cng-1NP_001122918.1 PLN03192 153..>568 CDD:215625 150/419 (36%)
CAP_ED 446..563 CDD:237999 60/118 (51%)
CLZ 562..633 CDD:374604 5/13 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.