DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and unc-103

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001368173.1 Gene:unc-103 / 175527 WormBaseID:WBGene00006830 Length:898 Species:Caenorhabditis elegans


Alignment Length:873 Identity:185/873 - (21%)
Similarity:337/873 - (38%) Gaps:229/873 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 SASTVSHHPHAHGPPSQGGPGGPGPPHGGHPHHPHHGGAGSGGGSGPGSHGGQPHHQKPRRTA-- 556
            |..::|..|......|.||.||.|...||       ||.|:||.|             .||.|  
 Worm    74 SLRSLSPCPSLQSSSSIGGCGGGGMVGGG-------GGGGAGGSS-------------TRRNAAI 118

  Fly   557 ---SQRIRAATAARKLHFV-----------FDPAG-------------------------RLCYY 582
               |....:|...|...||           .||..                         .:.:|
 Worm   119 ASTSSTTSSAAGRRASAFVRRMSMAIPTLSADPVPFSAVLSLGADVLPEYKLQPTRIHHCTIVHY 183

  Fly   583 ------WSMVVSMAFLYN--FWVIIYRFAFQEINRRTIAIWF-----CLDYLSDFLYLIDILFHF 634
                  |..::.:..:|.  |...:..|..:|:........|     .:|.:.|.::::||:.:|
 Worm   184 SPFKAVWDWIILLLVIYTAVFTPYVAAFLLRELQDTAKKSRFTEPLEIVDLIVDIMFIVDIIINF 248

  Fly   635 RTGYLEDG----VLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLS---------IGFNSILRS 686
            ||.|:.:.    .:.:|..|:.|||.... |.||.:..:|.|.|.:|         ||.....|.
 Worm   249 RTTYVNENDEACQVVSDPGKIATHYFKGW-FIIDMVAAVPFDLLLVSTNSDETTTLIGLLKTARL 312

  Fly   687 FRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIF----HWNGCLYHII------HKNNGF 741
            .|||::.|      :.:|::.|     ..|::..|:..|    ||..|:::.|      ||    
 Worm   313 LRLVRVAR------KLDRYSEY-----GAAVLLLLMATFALIAHWLACIWYAIGSAELSHK---- 362

  Fly   742 GSRNWVYHDSE----------------SADVVKQYLQSYYWCTLALTTIG-DLPKPRSKGEYVFV 789
             ...|::..|:                ...:..:|:.|.|:....:|:|| ......:..|.:|.
 Worm   363 -EYTWLHQLSKQLAQPYTSTNGTIPTGGPTLKSRYVTSLYFTLSTITSIGFGNVSATTDSEKIFT 426

  Fly   790 ILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWL 854
            |:.::.|.:::|:|.|:|:.|:..:.:....:..::..::.::|..::||.|:.::.::|.:.|.
 Worm   427 IIMMILGSLMYASVFGNVSAIIQRLYSGTARYHTEMSRLREFIRFHQIPNPLRQRLEEYFQHAWS 491

  Fly   855 TQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICR 919
            .....|....:...||.|:|:|.::::.:.|.....|..:..|.|..|.:|.|.....|||.:..
 Worm   492 YTNGIDMNLVLKGFPDCLQADICLHLNRNLLSGCAAFAGSTPGCLRALSMRFRTTHSPPGDTLVH 556

  Fly   920 KGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISIL--NMGTAGNRRTASVRSVGYSDL 982
            :|::...:|.:.||.::::.|: .|||..|.....|||..:|  .:|    :.:.:||::.|.||
 Worm   557 RGDILTGLYFIARGSVEILNDD-NTVMGILGKDDIFGENPLLYDEVG----KSSCNVRALTYCDL 616

  Fly   983 FVLSKKDMWDVLKEYPA-ARVRLESIAV------------KRLEKYK----KAPLEKVKYF---- 1026
            ..:.:.|:.|||..||. |....:::.:            |:.:::|    .:.:.|.:|.    
 Worm   617 HKILRDDLLDVLDMYPEFAETFCKNLTITYNLRDDAQSLRKKFDRHKLLRMSSSMNKDRYTTPPD 681

  Fly  1027 ----------NVVAMGRCQSTP-GLVESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQ 1080
                      :..::.||.|.| ...:|.|..| .....||           |.||...      
 Worm   682 GDHGNAAVRRSAESVSRCDSNPIDRRQSAGSRS-SSRCSPP-----------HAALTAT------ 728

  Fly  1081 QPHRQEST---QTSSQTHGYSPRSYADRLARATDSPRSVSPSAHGSEERPRSRTTSHHSIRPQSQ 1142
               |.|:|   :.|:..|......:.|..|.|..:..::||:..|:...|   ||:.|     :.
 Worm   729 ---RSEATPLLRRSTNHHEEDDALFDDIRAFARGNTVTMSPTVAGNSVSP---TTAIH-----ND 782

  Fly  1143 PSHTGHICDSSSQLECYGAGVGGAGGGTTPLLGSHEVLEDEIKRLRERLHTVESENQALNTKLSQ 1207
            ..|:..:.|.|...|...|.:.|                       .||.::||:.:.:..|.:.
 Worm   783 GIHSQQLSDRSDDYEERRANMFG-----------------------RRLESIESQMERMQNKFNS 824

  Fly  1208 QQWDLENRLAEI-EMQICGVSSTSSVDP 1234
               |:|..:..: |..|...:.:|:.:|
 Worm   825 ---DMETLIKLVKEQSIIRNNGSSNEEP 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 62/290 (21%)
CAP_ED 890..1004 CDD:237999 35/116 (30%)
DUF4655 1084..>1154 CDD:317882 17/72 (24%)
unc-103NP_001368173.1 PLN03192 190..>613 CDD:215625 99/444 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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