DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42260 and Hcn2

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_032252.1 Gene:Hcn2 / 15166 MGIID:1298210 Length:863 Species:Mus musculus


Alignment Length:861 Identity:201/861 - (23%)
Similarity:323/861 - (37%) Gaps:237/861 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 TVSHHPHAHGPPSQGGPGG----------PGPPHGG------------HPHHPHHG--------G 531
            |...||.:...|   ||..          ||...||            .|..|..|        |
Mouse    45 TTPSHPESADEP---GPRARLCSRDSACTPGAAKGGANGECGRGEPQCSPEGPARGPKVSFSCRG 106

  Fly   532 AGSG------GGSGPGSHGGQPH----------------------------HQKPRRTASQRIRA 562
            |.||      .||......|:|.                            .||......:|:::
Mouse   107 AASGPSAAEEAGSEEAGPAGEPRGSQASFLQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKS 171

  Fly   563 ATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYL 627
            |.|     ::..|.....:||...:.:..:.|..:|.....|  ....|.|.|...:.:||..:|
Mouse   172 AGA-----WIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSDTFFL 229

  Fly   628 IDILFHFRTG-YLEDGV-LQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYL-------------- 676
            :|::.:|||| .:||.. :..|..|::..|:. |.|.:|.:..:|:|:::|              
Mouse   230 MDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTA 293

  Fly   677 ----SIGFNSILRSFRLVKIYRFWAFMDRTER--HTNY---PNLFRSTALIHYLLVIFHWNGCLY 732
                .:.|..||...||:::.|...::.:.|.  |..|   ..:.|...||..:|::.||:|||.
Mouse   294 RALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQ 358

  Fly   733 HIIHKNNGFGSRNWVYHDSESADVVKQYLQSYYWCTL----------ALTTIG-DLPKPRSKGEY 786
            .::.....|.|..||..::         :.::.|..|          .:..|| ....|.|..:.
Mouse   359 FLVPMLQDFPSDCWVSINN---------MVNHSWSELYSFALFKAMSHMLCIGYGRQAPESMTDI 414

  Fly   787 VFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDY 851
            ...:|.::.|...:|..:||...::.|:.::|:::|.|...|:.||...::|...:.|:..::::
Mouse   415 WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEH 479

  Fly   852 LWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTL-KRVEIFQNTEAGFLCELVLRLRPVLFSPGD 915
            .: ..|..||:..:..|...|:.|| :|.:...| ..:.:|.|.:..|:..::.:|:..:|.|||
Mouse   480 RY-QGKMFDEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGD 542

  Fly   916 YICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYS 980
            ||.|:|.:||:||.:..|.:.|:....|.:  .|..|||||||.:|..|    |||||||:..|.
Mouse   543 YIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG----RRTASVRADTYC 601

  Fly   981 DLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP---LEKVKY------FN--------- 1027
            .|:.||..:..:||:|||..|...|::|:.||::..|..   |.||::      ||         
Mouse   602 RLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLSSGVFNNQENAIIQE 666

  Fly  1028 --------------------------------------VVAMGRCQ------------STPGLVE 1042
                                                  .|||..|.            .:|.||.
Mouse   667 IVKYDREMVQQAELGQRVGLFPPPPPPQVTSAIATLQQAVAMSFCPQVARPLVGPLALGSPRLVR 731

  Fly  1043 SCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLA 1107
            ......     ||||.:....     .|......:|.:.|.........|......|...|.||:
Mouse   732 RAPPGP-----LPPAASPGPP-----AASPPAAPSSPRAPRTSPYGVPGSPATRVGPALPARRLS 786

  Fly  1108 RATDSPRSVSPS-AHG-------SEERPRSRTTSHHSIRPQSQPSHTGHIC-------DSSSQLE 1157
            ||:....:..|| .||       :..||.|.:|      |:..|:.|....       ||:|.  
Mouse   787 RASRPLSASQPSLPHGVPAPSPAASARPASSST------PRLGPAPTARTAAPSPDRRDSASP-- 843

  Fly  1158 CYGAGVGGAGGGTTPL 1173
                   ||..|..||
Mouse   844 -------GAASGLDPL 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 61/273 (22%)
CAP_ED 890..1004 CDD:237999 46/113 (41%)
DUF4655 1084..>1154 CDD:317882 20/84 (24%)
Hcn2NP_032252.1 CAP_ED 517..625 CDD:237999 46/113 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 730..863 34/148 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 21/88 (24%)
Involved in subunit assembly 131..182 6/55 (11%)
Ion_trans_N 140..182 CDD:285597 6/46 (13%)
Ion_trans 202..447 CDD:278921 58/256 (23%)
Crp 511..>646 CDD:223736 53/140 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I3583
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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