DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and CNGA4

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_016872706.1 Gene:CNGA4 / 1262 HGNCID:2152 Length:577 Species:Homo sapiens


Alignment Length:472 Identity:195/472 - (41%)
Similarity:294/472 - (62%) Gaps:8/472 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 RTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCL 618
            :|......|.:.||||..|.||:|...|:|...:....:||..:::.|..|.::....:..|..|
Human     8 KTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVL 72

  Fly   619 DYLSDFLYLIDILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIG-FNS 682
            ||.||.|||:|::..|.||:||.|:|..|..::.:.|:.:..|::|...|:|.|.:|:.:| ...
Human    73 DYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTP 137

  Fly   683 ILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWV 747
            .||..|.::..|.:...||||..|.|||.||...|:.|:.|:.|||.|||..:.:..|||...||
Human   138 TLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWV 202

  Fly   748 YHDSESAD---VVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVAN 809
            |.|.....   :.:|||.|:|:.||.|||:||.|.|..:.||:|::...|..:|.|||::|.:::
Human   203 YPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSS 267

  Fly   810 IVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKA 874
            ::.:::.|...|......||.||:::.|...|:.:||.|:.:|.:.:|.::|...:..||::|:|
Human   268 VIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRA 332

  Fly   875 EIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVA 939
            |:|::|||.||.||:||||.||..|.||||:|:|..:|||:|:||||::|:||||:..|:|.|||
Human   333 EVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVA 397

  Fly   940 DNGKTVMASLKAGSYFGEISILNM----GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAA 1000
            |:|.|..|.|.||.|||||||:|:    ..:||||||:::|:||||||.|||:|:.:||.|||.|
Human   398 DDGITQYAVLGAGLYFGEISIINIKATGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQA 462

  Fly  1001 RVRLESIAVKRLEKYKK 1017
            :..:|....:.|.|..|
Human   463 QTIMEEKGREILLKMNK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 86/241 (36%)
CAP_ED 890..1004 CDD:237999 69/117 (59%)
DUF4655 1084..>1154 CDD:317882
CNGA4XP_016872706.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

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