DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and Hcn2

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_446136.1 Gene:Hcn2 / 114244 RGDID:620689 Length:863 Species:Rattus norvegicus


Alignment Length:785 Identity:185/785 - (23%)
Similarity:316/785 - (40%) Gaps:186/785 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   497 TVSHHPHAHGPPSQGGPGG----------PGPPHGG------------HPHHPHHG--------G 531
            |...||.:...|   ||..          ||...||            .|..|..|        |
  Rat    45 TTPSHPESADEP---GPRSRLCSRDSSCTPGAAKGGANGECGRGEPQCSPEGPARGPKVSFSCRG 106

  Fly   532 AGSG------GGSGPGSHGGQPH----------------------------HQKPRRTASQRIRA 562
            |.||      .||......|:|.                            .||......:|:::
  Rat   107 AASGPAAAEEAGSEEAGPAGEPRGSQASFLQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKS 171

  Fly   563 ATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYL 627
            |.|     ::..|.....:||...:.:..:.|..:|.....|  ....|.|.|...:.:||..:|
  Rat   172 AGA-----WIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSDTFFL 229

  Fly   628 IDILFHFRTG-YLEDGV-LQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYL-------------- 676
            :|::.:|||| .:||.. :..|..|::..|:. |.|.:|.:..:|:|:::|              
  Rat   230 MDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTA 293

  Fly   677 ----SIGFNSILRSFRLVKIYRFWAFMDRTER--HTNY---PNLFRSTALIHYLLVIFHWNGCLY 732
                .:.|..||...||:::.|...::.:.|.  |..|   ..:.|...||..:|::.||:|||.
  Rat   294 RALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQ 358

  Fly   733 HIIHKNNGFGSRNWVYHDSESADVVKQYLQSYYWCTL----------ALTTIG-DLPKPRSKGEY 786
            .::.....|.|..||..::         :.::.|..|          .:..|| ....|.|..:.
  Rat   359 FLVPMLQDFPSDCWVSINN---------MVNHSWSELYSFALFKAMSHMLCIGYGRQAPESMTDI 414

  Fly   787 VFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDY 851
            ...:|.::.|...:|..:||...::.|:.::|:::|.|...|:.||...::|...:.|:..::::
  Rat   415 WLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEH 479

  Fly   852 LWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTL-KRVEIFQNTEAGFLCELVLRLRPVLFSPGD 915
            .: ..|..||:..:..|...|:.|| :|.:...| ..:.:|.|.:..|:..::.:|:..:|.|||
  Rat   480 RY-QGKMFDEDSILGELNGPLREEI-VNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGD 542

  Fly   916 YICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYS 980
            ||.|:|.:||:||.:..|.:.|:....|.:  .|..|||||||.:|..|    |||||||:..|.
  Rat   543 YIIREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG----RRTASVRADTYC 601

  Fly   981 DLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP---LEKVKYFNVVAMGRCQSTPGLVE 1042
            .|:.||..:..:||:|||..|...|::|:.||::..|..   |.||::         ..:.|:..
  Rat   602 RLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQH---------DLSSGVFN 657

  Fly  1043 SCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQ-----QPHRQESTQTSSQTHGYSPRSY 1102
            :.....::|            ::.:.:.:.||.:..|:     .|...:.|...:........|:
  Rat   658 NQENAIIQE------------IVKYDREMVQQAELGQRVGLFPPPPPPQVTSAIATLQQAVAMSF 710

  Fly  1103 ADRLAR------ATDSPRSV-------------------SPSAHGSEERPRSRTTSHHSIRPQSQ 1142
            ..::||      |..|||.|                   ||.|..|.  ||:..||.:.: |.|.
  Rat   711 CPQVARPLVGPLALGSPRLVRRAPPGPLPPAASPGPPAASPPAAPSS--PRAPRTSPYGV-PGSP 772

  Fly  1143 PSHTG 1147
            .:..|
  Rat   773 ATRVG 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 61/273 (22%)
CAP_ED 890..1004 CDD:237999 46/113 (41%)
DUF4655 1084..>1154 CDD:317882 20/89 (22%)
Hcn2NP_446136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 21/88 (24%)
Involved in subunit assembly. /evidence=ECO:0000250 131..182 6/55 (11%)
Ion_trans_N 140..182 CDD:285597 6/46 (13%)
Ion_trans 202..447 CDD:278921 58/256 (23%)
Crp 511..>646 CDD:223736 53/140 (38%)
CAP_ED 517..625 CDD:237999 46/113 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 730..863 12/51 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I3503
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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