DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and LOC100498055

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_002935815.2 Gene:LOC100498055 / 100498055 -ID:- Length:763 Species:Xenopus tropicalis


Alignment Length:491 Identity:98/491 - (19%)
Similarity:182/491 - (37%) Gaps:122/491 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   778 PKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQ 842
            ||...|.:.:.||.|            |...|...:..|.|:: :|| :||......|...|.  
 Frog    92 PKGSQKKKLLSVINQ------------GPAQNNEKAAEAHRRQ-KAK-EGVSAEPTSRHYYNP-- 140

  Fly   843 VKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLR 907
                            |.:...|:|:.....|:..|.   ..:...:..:..||..:..:|..:.
 Frog   141 ----------------SSQNPDVTCVRKDSSAKKLIT---GAIMSNDFLRQLEASHVRCMVDCMY 186

  Fly   908 PVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTA 972
            ..::|....:.::|..|..:|::..|.|.|:.::  .::..:..|:.|||::||    ...:|||
 Frog   187 ERVYSKSQLVIQEGAAGNHLYVLADGLLDVIQNS--RLLGQMHPGTAFGELAIL----YNCKRTA 245

  Fly   973 SVRSVGYSDLFVLSKKDMWDVLKEYPAARVR-----------LESIAVKRLEK---------YKK 1017
            :|::|..|.::||.::...:::.....|:.:           |:.:..::|.|         |.|
 Frog   246 TVKAVTDSKIWVLDRQVFQNIMMSSAQAQHQEYFSFLRSVSLLKDLPEEKLSKIVDCLEVDFYDK 310

  Fly  1018 APL-----EKVKYFNVVAMGRCQSTPGLVESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQA 1077
            ...     |:...|.::|.|:...|.. ||  |....:|:    .|.|..... ..:||..:...
 Frog   311 GDYIIREGEEGNTFFIIAKGKVCVTQA-VE--GSQEPQEI----KTLGVGDYF-GEKALISEDVR 367

  Fly  1078 SQQQPHRQESTQ-------TSSQTHG-YSP-----RSYADRLARATDSPRSVSPSAHGSEERPRS 1129
            |......::.||       |.:|..| |..     |.|..:||            .:..:.|...
 Frog   368 SANIIAEEDDTQCLVIDRDTFNQMVGTYQELQTYLREYVFQLA------------LNDHDRRNAR 420

  Fly  1130 RTTSHHSI-RPQSQPSHTGHICDSSSQLECYG-----AGVGGAGGGTTPLLGSHEVLEDE----- 1183
            |.:.|||: |..|:.:....:....|....:.     ..:|..|.|...|:    .|:||     
 Frog   421 RKSLHHSMSRDNSEVNQLRELVSKFSSTSPFRYLDVITTLGTGGFGRVELV----KLKDEDMTFA 481

  Fly  1184 IKRLRERLHTVESENQALNTKLSQQQWDLENRLAEI 1219
            :|.:::: |.|::..|      ....|: :|.|.:|
 Frog   482 LKCIKKK-HIVDTHQQ------EHVYWE-KNILQQI 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 9/40 (23%)
CAP_ED 890..1004 CDD:237999 25/124 (20%)
DUF4655 1084..>1154 CDD:317882 17/83 (20%)
LOC100498055XP_002935815.2 CAP_ED 169..278 CDD:237999 25/114 (22%)
CAP_ED 287..402 CDD:237999 25/122 (20%)
STKc_cGK 460..719 CDD:270724 15/62 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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