DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cngb1

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_031757189.1 Gene:cngb1 / 100496200 XenbaseID:XB-GENE-980342 Length:1922 Species:Xenopus tropicalis


Alignment Length:638 Identity:192/638 - (30%)
Similarity:312/638 - (48%) Gaps:79/638 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   538 SGPGSHGGQPHHQKPRRTASQRIRAATAARKLHFV------------------------FDPAGR 578
            :.|......|....|.....:::.....|.:.|:.                        .||...
 Frog  1300 ASPSKKSAPPPPPPPPPAEEKKVEVEAQAEEEHYCEMLCCKFKTRPWRDRLLKLKFPSSIDPLTN 1364

  Fly   579 LCY-YWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDI-LFHFRTGYLED 641
            :.| .|...|.:|:.:|.|:|..|:||.......|..|..:|||.|.:||:|| :|..|..::..
 Frog  1365 VMYVLWLFFVVLAWNWNCWLIPVRWAFPYQTPSNIHYWLLMDYLCDLIYLLDITVFQSRLQFVRG 1429

  Fly   642 GVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNSILRSFRLVKIYRFWAFMDRTERHT 706
            |.:.|:...:|.||..|..|.:|.:.|||||.|||..|..|:||..|::|...|:.|.:|.|...
 Frog  1430 GDIITNKKDMREHYFKSERFKMDLISLLPLDLLYLKFGVKSLLRLPRILKYMAFFEFNNRLEAIL 1494

  Fly   707 NYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVYHDSESADVVKQYLQSYYWCTLAL 771
            :...::|......|||...|.|.|||:......|..|..||:.     .|...|::.|||....|
 Frog  1495 SKAYIYRVIRTTAYLLYCLHMNACLYYWASDYEGLSSTPWVFD-----GVGNSYIRCYYWAVKTL 1554

  Fly   772 TTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRR 836
            .|||.||.|.:..|..|.:|....|:..|:.::|.:.::|.:.:|.:..:::.:|....||...:
 Frog  1555 ITIGGLPDPDTLFELWFQLLNYFMGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNCYK 1619

  Fly   837 VPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCE 901
            :|..:|.:|..|::|.|.:|...||...:..||||::.::||:|:...:.:|.:||..:...:.:
 Frog  1620 IPRSVQNRVKMWYEYTWQSQGMLDESELMVQLPDKMRLDLAIDVNYSIVSKVILFQGCDRQMIYD 1684

  Fly   902 LVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVV-ADNGKTVMASLKAGSYFGEISILNMGT 965
            ::.|||.|::.||||:|:|||:|:||||:..|::||: ..:||||:.||||||.|||||:|.:| 
 Frog  1685 MLKRLRSVVYLPGDYVCKKGEIGREMYIIKAGQVQVLGGPDGKTVLVSLKAGSVFGEISLLAVG- 1748

  Fly   966 AGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLE---KYKKAPLEKVKYFN 1027
            .||||||:|.:.|:::||:|.|||:.::|..||.::..|...|.|.|:   |.|..|.::..:.:
 Frog  1749 GGNRRTANVVAHGFTNLFILDKKDLNEILLHYPESQKLLRKKAKKMLKNSSKPKDEPGQEKGFLH 1813

  Fly  1028 VVAMGRCQSTPGLV-------ESCG-------------RTSLEEMWLPPATAGASSLMHHHQALQ 1072
            ::...  ..||.|:       |..|             :|::|.....|...|:        .:.
 Frog  1814 IIPPR--PETPKLLKAAIAATEKMGFKGFSKLRRRMKVKTTIEPTTSSPVPPGS--------PVH 1868

  Fly  1073 QQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLARATDSPRSVSPSAHGSEE 1125
            ::....|.:|...::|:..|::        ||.....     .||||..|.|:
 Frog  1869 RRSPVPQIKPDDDDTTEIVSES--------ADNTVFI-----RVSPSPRGDEQ 1908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 81/239 (34%)
CAP_ED 890..1004 CDD:237999 56/114 (49%)
DUF4655 1084..>1154 CDD:317882 10/42 (24%)
cngb1XP_031757189.1 PTZ00121 <507..1098 CDD:173412
PLN03192 1359..>1745 CDD:215625 140/390 (36%)
CAP_ED 1673..1782 CDD:237999 55/109 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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