DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cnga2

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_004916824.1 Gene:cnga2 / 100494874 XenbaseID:XB-GENE-992758 Length:675 Species:Xenopus tropicalis


Alignment Length:524 Identity:231/524 - (44%)
Similarity:335/524 - (63%) Gaps:25/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   571 FVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFR 635
            ||.||:|:..|.|.:|:::..|||:::::.|..|.::....:|:||.|||:.|.:|:.||:..||
 Frog   144 FVVDPSGKWYYRWLLVITLPVLYNWFLLVVRACFDDLQTSYVALWFTLDYICDVIYIADIVIRFR 208

  Fly   636 TGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-SILRSFRLVKIYRFWAFM 699
            ||:||.|:|..|...|..:|:.:..|.:|.:.:||.|..|.::|.: ..||..||:...|.:...
 Frog   209 TGFLEQGLLVRDPKTLSNNYIRTLQFKLDIISILPTDLGYFAVGIHRPELRFNRLLHFPRMFECF 273

  Fly   700 DRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESADVVKQYL 761
            |:||..|:|||:||...|:.|:|:|.|||||:|:...|..|||:.:|||   .|.:...:.::|:
 Frog   274 DQTETRTSYPNIFRIFNLVLYILLIIHWNGCIYYAFSKAIGFGADSWVYPNLTDPKHGYLAREYV 338

  Fly   762 QSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLD 826
            ...||.||.||||||.|:|.:..||:|||...|.|:::|||::|:|.:::::::|.|.|||:|:|
 Frog   339 YCLYWSTLTLTTIGDTPQPMTDTEYLFVIFDFLVGVLIFATIVGNVGSMISNMNATRTEFQSKID 403

  Fly   827 GVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIF 891
            .:|.||:.|||...|:.|||.||||||..:|..||...:..|||||:|||||||||||||:|.||
 Frog   404 AIKHYMQFRRVSKDLEAKVILWFDYLWTNKKTVDEREVLKNLPDKLRAEIAINVHLDTLKKVRIF 468

  Fly   892 QNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFG 956
            ||.|||.|.||||:|||.:|||||||||||::|:||||:..|:|.||.::|.|..|.|.:||.||
 Frog   469 QNCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVGEDGITHYAVLTSGSCFG 533

  Fly   957 EISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP 1019
            ||||||:  ...|||||||:||:||||||.|||.|:.:.|.|||.|:..||       |:.::. 
 Frog   534 EISILNIEGSKMGNRRTASIRSIGYSDLFCLSKDDLMEALVEYPDAKKILE-------ERGREI- 590

  Fly  1020 LEKVKYFNVVAMGRCQSTPGLVESCGRTSLEEMWLPPATAGASSLMHHHQALQQQHQASQQQPHR 1084
                    ::..|....|...:...|::|.|.:.|..:..   .::|...|...:..::.||..:
 Frog   591 --------LIKEGLLDETKEKISVKGKSSEERLELVESNL---DILHTRFARLLREYSNAQQTLK 644

  Fly  1085 QEST 1088
            |..|
 Frog   645 QRVT 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 94/241 (39%)
CAP_ED 890..1004 CDD:237999 73/115 (63%)
DUF4655 1084..>1154 CDD:317882 2/5 (40%)
cnga2XP_004916824.1 Ion_trans 153..395 CDD:366146 94/241 (39%)
Radical_SAM 428..>481 CDD:388499 35/52 (67%)
CAP_ED 467..583 CDD:237999 73/115 (63%)
CLZ 583..651 CDD:374604 15/85 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 124 1.000 Domainoid score I5440
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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