DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and kcnh8

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_031760363.1 Gene:kcnh8 / 100490406 XenbaseID:XB-GENE-981673 Length:1114 Species:Xenopus tropicalis


Alignment Length:826 Identity:173/826 - (20%)
Similarity:334/826 - (40%) Gaps:202/826 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 LHF-VFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQE----INRRTIAIWFCLDYLSDFLYLI 628
            ||| .|..|      |..::.:|..|....:.|..:|::    .:.|:..:   .|...:.|::.
 Frog   215 LHFSTFKAA------WDWLILLATFYVAVTVPYNVSFEDNDDPSSTRSTTV---SDISVEILFIT 270

  Fly   629 DILFHFRTGYL-EDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN----------S 682
            ||:.:|||.|: |.|.:...:..:..||: :|.|.||.:..||.|.||   .||          .
 Frog   271 DIILNFRTTYVSESGQVIFKSRSICIHYV-TTWFVIDLIAALPFDLLY---AFNVTVDNLVSLVH 331

  Fly   683 ILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIF----HWNGCLYHIIHKNNGFGS 743
            :|::.||:::.|....:||..:|        ||.::..|:.:|    ||..|::::|.|   ...
 Frog   332 LLKTIRLLRLLRLLQKLDRYSQH--------STIVLTLLMSMFALLAHWMACIWYVIGK---MEM 385

  Fly   744 RN--------WVY------------HDSESADVVKQ-YLQSYYWCTLALTTIG--------DLPK 779
            :|        |::            :||:....::. |:.|.|:...:||::|        |:.|
 Frog   386 KNKPLSWDIGWLHELGKRLESPFHSNDSQGGPTIRSTYIASLYFTLSSLTSVGFGNVSANTDVEK 450

  Fly   780 PRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVK 844
                   :|.|..:|.|.::.|.|.|:|..|:..:.:....:..:...:|.::|:..:|..|:.:
 Frog   451 -------IFSICIMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQLKQR 508

  Fly   845 VIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPV 909
            ::::|...|......|....:...||:|:::|.:.::.:.| ::.:|::...|.|..|.|.::..
 Frog   509 MLEYFQTNWSVNNGIDSHELLKDFPDELRSDITMYLNKEIL-QLSLFESASRGCLRSLSLHIKTS 572

  Fly   910 LFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFG-EISILNMGTAGNRRTAS 973
            ..:||:|:.|:|:..:.:|:|..|.::|:.|.  .|:|.|..|...| .:||.:.....|   |.
 Frog   573 FCAPGEYLLRQGDALQAIYLVCSGSMEVLKDG--MVLAILGKGDLIGANLSIKDQVIKTN---AD 632

  Fly   974 VRSVGYSDLFVLSKKDMWDVLKEYPA-ARVRLESI----AVKRLEKYKKAPLEKVKYFNVVAMGR 1033
            |:::.|.||..:..|.:::||..||. |...:|.|    .....|.::...:.::.         
 Frog   633 VKALTYCDLQCIILKGLYEVLDFYPEYAHTFVEHIQQDLTYNLREGHESDRMSRLS--------- 688

  Fly  1034 CQSTPGLVESCGRTSLEEMWLPPATAGASSLMH-HHQALQQQHQASQQQPH------RQESTQTS 1091
            |:||....:..|..|:...        .||::. ..:..::...:|....|      :.:.:.||
 Frog   689 CKSTLSQTDLRGNGSINNR--------LSSIVEDEDEDTEEDEPSSPSSIHTRNTASKYKKSATS 745

  Fly  1092 SQTHGYSPRSYADRLARATDSP-RSVSPSA----HGSEERPRSRTTSHHSI----------RPQS 1141
            :.:.|.:.:|:...:  ...|| |:.:||:    ..:|....||...::.:          .|..
 Frog   746 NSSLGINLKSFPGTV--PFKSPLRTCNPSSTMARQENEPNLNSRKRENNLMLNLPTVTSLGPPDL 808

  Fly  1142 QPSHTGHICDSSS-------QLECY----GAGVGG---------------AGGGTTPLLG--SHE 1178
            .|.....|.|.:|       ..|.|    .|.:|.               ....|...:|  :||
 Frog   809 SPRVVDGIEDHNSNDEGQAFDFEAYRLRQEARLGQPIREVSDFNPAILFITAEETKQQIGRLNHE 873

  Fly  1179 V--LEDEIKRLRERLHTVES--EN------------------QALNTKLSQQQWDLENRLAEIEM 1221
            |  |..::.:|.:.:.:|.:  ||                  .|:.|.:......::||:.....
 Frog   874 VSSLTQKVSQLGKDMKSVMNILENLLAVQRPVGYYSTYGTVLDAIRTTIGSPMEQIQNRMTWTTN 938

  Fly  1222 QIC-------------------GVSSTSSVDPENETEELERNRESI 1248
            |.|                   .||...::||.:.....:||..:|
 Frog   939 QSCMQRPAETLVGTPTQLCQGAVVSDLWNMDPASVGSSPQRNGSNI 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 66/285 (23%)
CAP_ED 890..1004 CDD:237999 34/115 (30%)
DUF4655 1084..>1154 CDD:317882 16/84 (19%)
kcnh8XP_031760363.1 PAS_9 40..135 CDD:404329
PLN03192 200..>617 CDD:215625 102/435 (23%)
PRK11753 580..>658 CDD:236969 24/82 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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