DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cnga4

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_017945387.2 Gene:cnga4 / 100489546 XenbaseID:XB-GENE-996762 Length:573 Species:Xenopus tropicalis


Alignment Length:459 Identity:194/459 - (42%)
Similarity:301/459 - (65%) Gaps:6/459 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   565 AARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLID 629
            :.|....:.||||...|.|..::.:...||:.:||.|..|.|:..:.:.:|..||||.|.||::|
 Frog    40 STRNRSSILDPAGNWYYCWLNIMVLPVTYNWVIIICRSCFPELQYQYLPVWLSLDYLCDVLYVMD 104

  Fly   630 ILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNS-ILRSFRLVKIY 693
            |:.:|.||:||:|:|.||...:..||::|:.|..|.:.:||.||||..:|.:: .:|..|.::.:
 Frog   105 IIANFHTGFLEEGILVTDRHLIARHYISSSKFRWDLISVLPTDFLYFKLGIHTPAVRINRFLRFH 169

  Fly   694 RFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESAD 755
            |.:...||||....|||.||...|:.|:.|:.|||.|:|..:....|||...||:   .||:.|.
 Frog   170 RLFESFDRTETRIPYPNAFRICKLMAYIFVVIHWNSCVYFALSSFIGFGKDKWVHPNITDSDFAR 234

  Fly   756 VVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKE 820
            :.:|||.|:|:.||.|||:||:|.|..:.|::|:::..|..::.|||::|.:.::|:::::|.:.
 Frog   235 LGRQYLYSFYFSTLILTTVGDIPPPVQEEEWLFMVVDFLIAVLGFATIMGSMTSVVSNMNSADEA 299

  Fly   821 FQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTL 885
            |....|.||.|::|.:|...::.|||.|..:|.:.:|.::|...:..||:||:.|:|::|||..|
 Frog   300 FYPNYDNVKLYLKMYKVNRSVKKKVIAWHQHLQIYKKLTNENDILQNLPEKLRVEVAVSVHLPIL 364

  Fly   886 KRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLK 950
            .:|:||||.|...|.||||:|:|.::|||:|:|:||::|:||||:..|:|.||||:|.|..|.|.
 Frog   365 SKVQIFQNCEKSLLEELVLKLKPQVYSPGEYVCKKGDIGREMYIIKEGKLAVVADDGVTQFAELG 429

  Fly   951 AGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLE 1013
            .|:|||||||||:  .|:||||||:::|:||||||.|||:|:.|.|:|||.|:..||....:.|.
 Frog   430 EGNYFGEISILNIRGNTSGNRRTANIKSIGYSDLFCLSKEDLRDALREYPDAKAILEQKGREILL 494

  Fly  1014 KYKK 1017
            |..|
 Frog   495 KMNK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 91/241 (38%)
CAP_ED 890..1004 CDD:237999 68/115 (59%)
DUF4655 1084..>1154 CDD:317882
cnga4XP_017945387.2 Ion_trans 55..295 CDD:395416 90/239 (38%)
CAP_ED 369..485 CDD:237999 68/115 (59%)
CLZ 485..555 CDD:406832 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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