DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cnga4

DIOPT Version :10

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_017945387.2 Gene:cnga4 / 100489546 XenbaseID:XB-GENE-996762 Length:573 Species:Xenopus tropicalis


Alignment Length:459 Identity:194/459 - (42%)
Similarity:301/459 - (65%) Gaps:6/459 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   565 AARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLID 629
            :.|....:.||||...|.|..::.:...||:.:||.|..|.|:..:.:.:|..||||.|.||::|
 Frog    40 STRNRSSILDPAGNWYYCWLNIMVLPVTYNWVIIICRSCFPELQYQYLPVWLSLDYLCDVLYVMD 104

  Fly   630 ILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNS-ILRSFRLVKIY 693
            |:.:|.||:||:|:|.||...:..||::|:.|..|.:.:||.||||..:|.:: .:|..|.::.:
 Frog   105 IIANFHTGFLEEGILVTDRHLIARHYISSSKFRWDLISVLPTDFLYFKLGIHTPAVRINRFLRFH 169

  Fly   694 RFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESAD 755
            |.:...||||....|||.||...|:.|:.|:.|||.|:|..:....|||...||:   .||:.|.
 Frog   170 RLFESFDRTETRIPYPNAFRICKLMAYIFVVIHWNSCVYFALSSFIGFGKDKWVHPNITDSDFAR 234

  Fly   756 VVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKE 820
            :.:|||.|:|:.||.|||:||:|.|..:.|::|:::..|..::.|||::|.:.::|:::::|.:.
 Frog   235 LGRQYLYSFYFSTLILTTVGDIPPPVQEEEWLFMVVDFLIAVLGFATIMGSMTSVVSNMNSADEA 299

  Fly   821 FQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTL 885
            |....|.||.|::|.:|...::.|||.|..:|.:.:|.::|...:..||:||:.|:|::|||..|
 Frog   300 FYPNYDNVKLYLKMYKVNRSVKKKVIAWHQHLQIYKKLTNENDILQNLPEKLRVEVAVSVHLPIL 364

  Fly   886 KRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLK 950
            .:|:||||.|...|.||||:|:|.::|||:|:|:||::|:||||:..|:|.||||:|.|..|.|.
 Frog   365 SKVQIFQNCEKSLLEELVLKLKPQVYSPGEYVCKKGDIGREMYIIKEGKLAVVADDGVTQFAELG 429

  Fly   951 AGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLE 1013
            .|:|||||||||:  .|:||||||:::|:||||||.|||:|:.|.|:|||.|:..||....:.|.
 Frog   430 EGNYFGEISILNIRGNTSGNRRTANIKSIGYSDLFCLSKEDLRDALREYPDAKAILEQKGREILL 494

  Fly  1014 KYKK 1017
            |..|
 Frog   495 KMNK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 91/242 (38%)
CAP_ED 890..1004 CDD:237999 68/115 (59%)
cnga4XP_017945387.2 Ion_trans 55..295 CDD:459842 90/239 (38%)
CAP_ED 369..485 CDD:237999 68/115 (59%)
CLZ 485..555 CDD:465160 5/14 (36%)

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