DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and kcnh8

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_017207899.2 Gene:kcnh8 / 100002967 ZFINID:ZDB-GENE-060503-204 Length:975 Species:Danio rerio


Alignment Length:695 Identity:159/695 - (22%)
Similarity:302/695 - (43%) Gaps:101/695 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   569 LHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAF---QEINRRTIAIWFCLDYLSDFLYLIDI 630
            |||....||     |..::.:|..|....:.|...|   |::.|.|..    .|...:.|::|||
Zfish   212 LHFSTFKAG-----WDWLILLATFYVAVTVPYNVCFIGDQDLTRSTTV----TDIAVEILFIIDI 267

  Fly   631 LFHFRTGYL-EDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYL----SIGFNSILRSFRLV 690
            :|.|||.|: :.|.:..||.::..||| :|.|.||.:..||.|.||.    .:....:|::.||:
Zfish   268 VFSFRTTYVSKSGQVIFDARQICIHYM-TTWFIIDLVAALPFDLLYAFKVSVVSVVHLLKTVRLL 331

  Fly   691 KIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIF----HWNGCLYHIIHK-----NNGFGSRNW 746
            ::.|....|||..:|        ||.::..|:.:|    ||..|:::||.|     |.......|
Zfish   332 RLLRLLQKMDRYSQH--------STVVLTLLMSMFALLAHWMACIWYIIGKKEVESNADTWDIGW 388

  Fly   747 VYH-----DSESADVVKQ-----------YLQSYYWCTLALTTIG-DLPKPRSKGEYVFVILQLL 794
            ::.     :|....|..:           |:.:.|:...:||::| ......:..|.:|.|..:|
Zfish   389 LHELGKRLESPYEGVANRTLSSGPSLRSIYIAALYFTLSSLTSVGFGNVSANTDAEKIFSICTML 453

  Fly   795 FGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCS 859
            .|.::.|.|.|:|..|:..:.:....:..:...:|.::|:..:|..|:.:::::|...|......
Zfish   454 IGALMHALVFGNVTAIIQRMYSRWSSYHTRTKDLKDFIRVHHLPQSLKQRMLEYFQTTWSVNNGI 518

  Fly   860 DEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVG 924
            |....:...||:|:::||::::.:.|: :.:|.:...|.|..|.|.::....:||:|:.|:|:..
Zfish   519 DSNELLRDFPDELRSDIAMHLNKEILE-LSVFSSLSRGCLRSLSLHIKTSFCAPGEYLLRQGDAL 582

  Fly   925 KEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNMGTAGNRRTASVRSVGYSDLFVLSKKD 989
            :.::.|..|.::|:.||  .|:|.|..|...|  :.:::|....:..|.|:::.|.||..::.:.
Zfish   583 QALFFVCSGSMEVLKDN--MVLAILGKGDLIG--ANMSVGDRVIKTNADVKALTYCDLQCINLRG 643

  Fly   990 MWDVLKEYPAARVRLESIAVKRLEKYKKAPLEKVKYFNVVAMGRCQSTPGLVESCGRTSLEEMWL 1054
            :::||..||....|.    |:.:.......|.:.:..:|::....:|....:|..|.....:.:.
Zfish   644 LYEVLDLYPEYSHRF----VQDITHDLTYNLREGQESHVISRMSSKSMDTQMEGRGNGDAIQCYP 704

  Fly  1055 PPATAGASSLMHHHQ-----------ALQQQHQASQQQPHRQEST-QTSSQTHGYSPRSYADRLA 1107
            |.|.       ||::           .:|......:|:.|.|::. ||:.:.|..........|.
Zfish   705 PIAE-------HHNEEDDDDDDDEDDQIQYLSGGGKQKTHMQKNDHQTNKKLHIQHTTVTKPDLG 762

  Fly  1108 RATDSPRSVSPSAHGSEERPRSRTTSHHSIRPQSQPSHTGHICDSSSQLECYGAGVGGAGGGTTP 1172
            ..  |||.|.    |:|:            ...::.||| .|..|:.|....||  ......|..
Zfish   763 NL--SPRVVD----GTED------------SDGTENSHT-FIFSSAHQHSVSGA--TNTTATTAE 806

  Fly  1173 LLGSHEVLEDEIKRLRERLHTVESENQALNTKLSQQQWDLENRLA 1217
            |....|....:::.|.:.:.::..|...|...:....:.:|:.:|
Zfish   807 LAAKSEDTRGQLRHLNQEVSSLGREVAELGRVMRSLAFLIESMMA 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 70/271 (26%)
CAP_ED 890..1004 CDD:237999 30/113 (27%)
DUF4655 1084..>1154 CDD:317882 16/70 (23%)
kcnh8XP_017207899.2 PAS_9 36..131 CDD:315989
Ank_2 193..>620 CDD:330894 109/430 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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