DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cnga1a

DIOPT Version :9

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001139095.1 Gene:cnga1a / 100001558 ZFINID:ZDB-GENE-090312-66 Length:697 Species:Danio rerio


Alignment Length:585 Identity:236/585 - (40%)
Similarity:338/585 - (57%) Gaps:36/585 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   550 QKPRRTASQRIRAATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAI 614
            :|.:....::.:......|..||.:|||.|.|.|.::::...:||:.|||.|..|:|:....:..
Zfish   109 EKEKEKEKEKEKEKKEGPKEVFVINPAGLLYYQWLLIITFPVMYNWTVIIARACFEELQHEYLLT 173

  Fly   615 WFCLDYLSDFLYLIDILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIG 679
            ||.|||.||.|||.|:.|..||||||.|:|..|...|...|.:|..|.:|.:.:||.|..|..:|
Zfish   174 WFLLDYTSDLLYLADMAFRARTGYLEQGLLVKDEKLLLKRYTDSLQFRLDVISMLPTDIFYFILG 238

  Fly   680 FN-SILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGS 743
            .: ..:|..:|:::.|.:.|...:|..|||||:||...|:.|:::|.|||.|||....|:.||||
Zfish   239 LDYPEIRINKLLRLNRMFEFFKISETMTNYPNIFRICTLVMYIIIIIHWNACLYFSFSKSIGFGS 303

  Fly   744 RNWVY---HDSESADVVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLG 805
            ..|||   .:.|..:::::|..|.||.||.|||||:.|.|....|:.|.::..|.|:::|||::|
Zfish   304 DAWVYPALTEPEFGELMRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVVDFLVGVLIFATIVG 368

  Fly   806 HVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPD 870
            ::|.::::::||:.:|||::|.:|.||..|.|...|:.:|||||||||..:|..||...:..|||
Zfish   369 NIATMISNMNAAQAQFQARIDNIKQYMHARHVSKELEDRVIKWFDYLWTNKKAQDEREVLRYLPD 433

  Fly   871 KLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRL 935
            ||:|||.:||||||||:|.||.:.|||.|.||||:|||.:|||||||||||::|:||||:..|:|
Zfish   434 KLRAEIGMNVHLDTLKKVRIFADCEAGLLIELVLKLRPQVFSPGDYICRKGDIGREMYIIKDGKL 498

  Fly   936 QVVADNGKTVMASLKAGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYP 998
            .||||:|.|....|..|||||||||||:  ..|||||||::||:||||||.|||.|:.:.|.|||
Zfish   499 AVVADDGVTQFVVLGDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYP 563

  Fly   999 AARVRLESIAVKRLEKYKKAPLEKVKYFNVVAMGRCQSTPGLVESCGRTSLEEMWLPPATAGASS 1063
            .|:..||       ||.::..|:                .||:|      |:...|.|.......
Zfish   564 DAKAMLE-------EKGRQILLK----------------DGLLE------LDPSKLKPDERDLED 599

  Fly  1064 LMHH-HQALQQQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLARATDSPRSVSPSAHGSEERP 1127
            .::. :..||.......:...:||.|:.|.:........:...:....:........|...||.|
Zfish   600 RVNRMYSTLQLMQTKVNKLLAQQEETRKSIRRRIIEIERFVGEVVEDEEEEEKEETEAEKKEEEP 664

  Fly  1128  1127
            Zfish   665  664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 95/241 (39%)
CAP_ED 890..1004 CDD:237999 73/115 (63%)
DUF4655 1084..>1154 CDD:317882 8/44 (18%)
cnga1aNP_001139095.1 Ion_trans 168..381 CDD:278921 84/212 (40%)
Crp 447..>601 CDD:223736 88/182 (48%)
CAP_ED 453..569 CDD:237999 73/115 (63%)
CLZ 569..>625 CDD:293134 15/84 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 125 1.000 Domainoid score I5401
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - O PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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