DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13526 and myl2b

DIOPT Version :9

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001035134.1 Gene:myl2b / 677750 ZFINID:ZDB-GENE-060331-137 Length:168 Species:Danio rerio


Alignment Length:135 Identity:21/135 - (15%)
Similarity:61/135 - (45%) Gaps:5/135 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IDELRDAFEKYDLDSNGTLSANEVRLALISVG-YEITEAELYDLIHSVAVRDEERLDLKKFIRMM 77
            |.|.::||...|.:.:|.:..|::|....::| ..:.:.||.:::...    ...::...|:.|.
Zfish    26 IQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRLNVKQEELDEMLKEA----PGPINFTVFLTMF 86

  Fly    78 APRMANVDSDKSLCRTFNMIDRDRDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRIS 142
            ..::...|:::::...|.:.|.:..|.:....:..::....:..:.::::.:..|...|..|.:.
Zfish    87 GEKLKGADAEETILNAFKVFDPEGKGTLRKDFLSRMLTTQADRFSPEEMEQMFSAFPPDAAGNLD 151

  Fly   143 LRDFV 147
            .::.|
Zfish   152 YKNLV 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 21/135 (16%)
EFh 16..78 CDD:238008 12/62 (19%)
EFh 92..151 CDD:238008 7/56 (13%)
myl2bNP_001035134.1 FRQ1 15..163 CDD:227455 21/135 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.