DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13526 and cabp1b

DIOPT Version :10

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001002414.1 Gene:cabp1b / 436687 ZFINID:ZDB-GENE-040718-111 Length:167 Species:Danio rerio


Alignment Length:153 Identity:46/153 - (30%)
Similarity:84/153 - (54%) Gaps:5/153 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFSGNELTNEHIDELRDAFEKYDLDSNGTLSANEVRLALISVGYEITEAELYDLIHSVAVRDEER 67
            |....||..|.:||||:||:::|.|.:|.:...::...:.::||..||.||.:|...:.:.....
Zfish    13 SKKNRELRPEEMDELREAFKEFDKDKDGFIGCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77

  Fly    68 LDLKKFIRMMAPRMANVDSD----KSLCRTFNMIDRDRDGYVTVQDVR-AIMVVLGEVVTDDDIK 127
            :|.:.|:.:|.|::....:|    |.|...|...|.:.||.::..::| |:..:||:.|...|::
Zfish    78 VDFEDFVELMGPKLLAETADMIGVKELRDAFKEFDTNGDGQISTAELREAMKKLLGQQVGHRDLE 142

  Fly   128 DICQAVDMDGDGRISLRDFVGFM 150
            ||.:.:|::|||.:...:||..|
Zfish   143 DILRDIDLNGDGHVDFEEFVRMM 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 45/149 (30%)
cabp1bNP_001002414.1 PTZ00184 18..165 CDD:185504 44/146 (30%)

Return to query results.
Submit another query.