DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13526 and Efcab3

DIOPT Version :10

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_038942051.1 Gene:Efcab3 / 303589 RGDID:1305423 Length:6926 Species:Rattus norvegicus


Alignment Length:190 Identity:42/190 - (22%)
Similarity:79/190 - (41%) Gaps:49/190 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GNELTNEHIDELRDAFEKYDLDSN---------------GTLSANEVRLALISVGYEITEAELYD 55
            |.|||.|.:.||.:.. ..|.|.|               |.:|||::...:.|:|.::|:.|..|
  Rat  3843 GVELTEEEVIELMNNL-PVDTDGNFYHNRLMGTVKSLKRGKVSANKLDTVVKSMGAKLTDMEYKD 3906

  Fly    56 LIHSVAVRDEERLDLKKFIRMMAPRMAN-------------------------------VDSDKS 89
            :..|:.|.|...:::|..:.:|.....|                               ||.|:.
  Rat  3907 MAKSLPVSDAGEIEMKNLVDVMEAYTGNKIDINDLKYILGSMGIELTEKAISDLAQVLPVDDDEM 3971

  Fly    90 LC--RTFNMIDRDRDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRISLRDFV 147
            :.  |..|.|...::|.|.|.::..::..:...:|||::||:.:.:.:|.:|:..|.:.:
  Rat  3972 VFQNRLLNEIKTLKEGKVDVSNMDTVLDNMEIRLTDDELKDLIETLPVDANGKAELTEMM 4031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 41/189 (22%)
Efcab3XP_038942051.1 PTZ00184 155..286 CDD:185504
FRQ1 2265..2360 CDD:444056
EF-hand_8 6556..6606 CDD:404678
Blue background indicates that the domain is not in the aligned region.

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