DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13526 and Pvalb

DIOPT Version :9

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001317615.1 Gene:Pvalb / 19293 MGIID:97821 Length:110 Species:Mus musculus


Alignment Length:118 Identity:30/118 - (25%)
Similarity:54/118 - (45%) Gaps:24/118 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LSANEVRLALISVGYEITEAELYDLIHSVAVRDEERLDLKKFIRMMAPRMANVDSDKSLCRTFNM 96
            |||.:::.|                |.:.|..|.  .|.|||.:|:..:..|.|..|   :.|::
Mouse     7 LSAEDIKKA----------------IGAFAAADS--FDHKKFFQMVGLKKKNPDEVK---KVFHI 50

  Fly    97 IDRDRDGYVTVQDVRAIMVVLGEVVTD---DDIKDICQAVDMDGDGRISLRDF 146
            :|:|:.|::...::.:|:........|   .:.|.:..|.|.||||:|.:.:|
Mouse    51 LDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLLAAGDKDGDGKIGVEEF 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 30/118 (25%)
EFh 16..78 CDD:238008 12/45 (27%)
EFh 92..151 CDD:238008 15/58 (26%)
PvalbNP_001317615.1 EFh_parvalbumin_alpha 9..109 CDD:319997 28/116 (24%)
EF-hand motif 9..38 CDD:319997 10/46 (22%)
EF-hand motif 43..72 CDD:319997 6/31 (19%)
EF-hand motif 82..109 CDD:319997 9/22 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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