DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13526 and mlc-4

DIOPT Version :9

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_497700.1 Gene:mlc-4 / 175440 WormBaseID:WBGene00003372 Length:172 Species:Caenorhabditis elegans


Alignment Length:136 Identity:26/136 - (19%)
Similarity:65/136 - (47%) Gaps:6/136 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IDELRDAFEKYDLDSNGTLSANEVRLALISVGYEITEAELYDLIHSVAVRDEERLDLKKFIRMMA 78
            |.|.::||...|.:.:|.:...:::....|:|.|:||..:..:|:...  ..:.::...|:.:..
 Worm    29 IQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAP--GAQPINFTMFLTLFG 91

  Fly    79 PRMANVDSDKSLCRTFNMIDRDRDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRISL 143
            .::...|.::.:...|...|.|..|.:..:.:|.::..:||..:::.:.::.:...:.| |:.  
 Worm    92 EKLTGTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKG-GQF-- 153

  Fly   144 RDFVGF 149
             |:|.|
 Worm   154 -DYVEF 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 26/136 (19%)
EFh 16..78 CDD:238008 12/61 (20%)
EFh 92..151 CDD:238008 12/58 (21%)
mlc-4NP_497700.1 FRQ1 17..168 CDD:227455 26/136 (19%)
EFh 31..>75 CDD:238008 11/43 (26%)
EFh 103..163 CDD:238008 12/60 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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