DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13526 and pvalb

DIOPT Version :9

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_002934266.1 Gene:pvalb / 100486372 XenbaseID:XB-GENE-942844 Length:110 Species:Xenopus tropicalis


Alignment Length:83 Identity:21/83 - (25%)
Similarity:44/83 - (53%) Gaps:6/83 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KKFIRMMAPRMANVDSDKSLCRTFNMIDRDRDGYVTVQDVRAIM---VVLGEVVTDDDIKDICQA 132
            |||..:...:..:.|..|   :.|:::|:||.|::...:::.::   ...|..::|.:.|.:..|
 Frog    28 KKFFELCGLKKKSPDDVK---KVFHILDKDRSGFIEEDELKLLLQGFATDGRALSDKETKALLAA 89

  Fly   133 VDMDGDGRISLRDFVGFM 150
            .|.||||:|.:.:|...:
 Frog    90 GDKDGDGKIGVDEFTALV 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 21/83 (25%)
EFh 16..78 CDD:238008 3/6 (50%)
EFh 92..151 CDD:238008 16/62 (26%)
pvalbXP_002934266.1 EFh_parvalbumin_alpha 9..109 CDD:319997 21/83 (25%)
EF-hand motif 9..38 CDD:319997 3/9 (33%)
EF-hand motif 43..72 CDD:319997 6/31 (19%)
EF-hand motif 82..109 CDD:319997 9/26 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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