DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13526 and efcab11

DIOPT Version :9

Sequence 1:NP_611714.1 Gene:CG13526 / 37613 FlyBaseID:FBgn0034774 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001107284.1 Gene:efcab11 / 100135073 XenbaseID:XB-GENE-962640 Length:163 Species:Xenopus tropicalis


Alignment Length:127 Identity:29/127 - (22%)
Similarity:67/127 - (52%) Gaps:2/127 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FEKYDLDSNGTLSANEVRLALISV-GYEITEAELYDLIHSVAVRDEERLDLKKFIRMMAPRMANV 84
            |:..|..:.|.||..::::|::.: ||:.::.|:..::.|..: :...:....|::|||.:.|..
 Frog    27 FQLCDEGNKGYLSREDLKVAVVMLFGYKPSKLEVDSMLSSFMI-NTTGVTSDNFLKMMALKKAAQ 90

  Fly    85 DSDKSLCRTFNMIDRDRDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRISLRDF 146
            .|..:....|::.|....|::|::|.:.....:...:::..:.:..:.||.|.||.:|.:||
 Frog    91 LSFGNQREIFSVFDVHCRGFLTLEDFKRAFRQVAPHLSERTVVEAFREVDQDSDGLVSYKDF 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13526NP_611714.1 PTZ00184 7..152 CDD:185504 29/127 (23%)
EFh 16..78 CDD:238008 12/57 (21%)
EFh 92..151 CDD:238008 13/55 (24%)
efcab11NP_001107284.1 FRQ1 14..152 CDD:227455 27/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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