DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30268 and Cfap61

DIOPT Version :9

Sequence 1:NP_611712.2 Gene:CG30268 / 37610 FlyBaseID:FBgn0050268 Length:1240 Species:Drosophila melanogaster
Sequence 2:XP_008760507.2 Gene:Cfap61 / 311496 RGDID:1311519 Length:1235 Species:Rattus norvegicus


Alignment Length:1330 Identity:297/1330 - (22%)
Similarity:550/1330 - (41%) Gaps:289/1330 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RRIE--DLYDAKSTWH-FGVKETPPLDTLFLKNQAQRLI-VYNKQEYHLLLAYSEFANHPNIPVL 79
            ||.|  |::..|:... |..|....|:.::|..:|...: |.|.:|.  ::|:|.|.::||..|.
  Rat    17 RRTESQDIFCIKTLIRKFTQKLFGRLNIIYLLEKANLAVTVCNDKEE--IMAHSIFVDYPNWNVA 79

  Fly    80 ANDLWLHWLNVRFCVDLPITLLNAIFFNFFICKDGHSQ-MLKKVILEVFYTEHLVNYMLVFKPPD 143
            ..|.|:.... ....::|.|.||.:|.:||:..|.::. .||::|..||.....:.::.:..|  
  Rat    80 KQDNWIPVFR-ELDKEIPCTPLNTLFMHFFVAVDEYATGCLKEIIRTVFKAVPELYFIFLIVP-- 141

  Fly   144 CPPGQYDAVQAFGTTYYPKHSKVSEQKHLP--------AVIVIQRRSTMPVLSFRKALPEDNDDI 200
                   ...:.|:|......:|.   ::|        ||.:..|....|.|..|||..||:||:
  Rat   142 -------TYLSLGSTLITVFDQVG---NIPCMNYDEEFAVHICHRHDHYPQLHIRKARVEDHDDL 196

  Fly   201 VEMIDSEDPELRKKHGDFYIAEHLLNAEGSDSDHNDKIIIAEFEEEIADNVKGAGLMWLSQSLDI 265
            :.:....|..|::.:|::::|| |:.|:    |.::..::.|.|.      |..|.|.:..|:::
  Rat   197 MPIFMHYDSTLKEIYGEYFLAE-LIEAQ----DEDNHAVVCEVEG------KAVGFMSVCASVNL 250

  Fly   266 KMLATNYHL--------------------------ERLGNLVRYTPGCTHAHVGFEVISVELKSY 304
            .:|...:.|                          |..||   .:.......|..|.:|::.   
  Rat   251 PLLHECFDLGPFHGFCFPHPDDLLEPPKEPSLEESEDTGN---KSDSQGSQRVVEEPVSIDT--- 309

  Fly   305 KELFTRKQME-----ERYKSHVSRINTDGQDETRNILFKKYKHIYEELREGVY-YITAHQDKLEI 363
            .|:...|..|     |...|.:|:::.|.||..:|:      .|...:.|..: .:::....|.:
  Rat   310 SEMIQEKDTETSISCEEVLSLLSKVSEDMQDLEKNL------SIISLVDEDDFGSLSSLSSSLLL 368

  Fly   364 SFDLPDGEKSTSENRLQYLAKASNGFLLKMFQLHPLVRYE-YTFYSLSAMFSAFPDHDYCVTLVP 427
            |.:       :|..|..||.: |..|.:::|.:..  ||| .:...:|.:||.||:.::|:..||
  Rat   369 SVE-------SSHFRPLYLGE-SAAFCIQLFCIDE--RYEARSLDFMSFVFSLFPNKNFCLISVP 423

  Fly   428 ANVSTSPCQRELLRFFLPVAHRPSSTVSENLFVAHRSTLFGE--LRVHRF-ESQEIDE-IRTL-- 486
               ..:| :..|::.|:.|....:.|:..:|:|.||:.|...  :|:.:| ::..::: :|||  
  Rat   424 ---HLTP-EFVLIQNFVKVVPFSNCTLDNDLYVFHRAGLLRSITIRLAKFLDTPGVEKLVRTLLL 484

  Fly   487 ----ISKQARKRESLSEDDSEDSKGIDNYTEDVLSIFEDIIREILEDPMCDLTCFTIRCGQSKKH 547
                :|..|:..|:..:.|..:           |.:|   :.|:...                  
  Rat   485 STKILSDLAQYNEAGRDPDGTE-----------LQVF---VAEVANQ------------------ 517

  Fly   548 TDCPLVGFIILRPFLVYDDISKIFMMPRDQFSLTH----KRGEIVMFRLHPFFQMWCKTILRTVA 608
                :||..::|..:..:.|...:.: .|....:|    :.|.:..|.|:|.|:.:.|..|:.: 
  Rat   518 ----IVGIAVIRKEMDIEYIRSHYNI-EDFIYFSHHQQEEHGRLNHFALNPIFRHYTKFFLKEI- 576

  Fly   609 LCDNYRELYYIHFFS-----------GISLPNDLMYNMMPIEPRR-----MKKNLFNYKCVSLRR 657
            |...|:...|...:|           ..||.:.|.| ::|:.|||     ::|...|    :..:
  Rat   577 LRLGYKSCLYYPVYSQTREGKLQSSYAHSLTSALHY-LVPVRPRRQIVYPLEKLGIN----APSK 636

  Fly   658 RVAKGKMSVNVSMDICTSRMRLFCHNLQPTMHMGGKNSLLIVGFSSTCMAFLRTVIFAWNSKDLI 722
            .|:|.:.|..::.   |:|..    .|:|.:.:..:  :::||.||..::||.|::|.       
  Rat   637 EVSKDQASYALNH---TNRKL----TLEPKVTVNAR--IVVVGASSVGISFLETLVFC------- 685

  Fly   723 NYKKYNCLPMVDITVLVGHGIIESAYDCDFSCNFCANARNCYVDTGNVNPFVRDTMQRMDVRHWV 787
            ::.|:|.|.::....|.|..::.:......:.:.|.|.:: ||              .|.:..||
  Rat   686 SHLKFNNLTLISTHGLPGKKLLSNEQRKFLASDHCFNDKD-YV--------------LMSLCSWV 735

  Fly   788 RFVSGEVKSIKRQEKVVELSDGCHLYYDKLVLMGATRY--------------------GFEDKEF 832
            ..|.|.:.:|.|..|.|.:|....::||.|:|....:|                    ....:.:
  Rat   736 NVVVGRMTAIDRVAKQVVVSKDEIVFYDHLILCTGQQYQVPCPTGADIEQHLTNREVMQLSKRRY 800

  Fly   833 KGHPIPLNYVVNNTRLD--RIIFYHKVCEMVELMESYYIIVYGYNLCIYECIHFLVTHGCKAQNI 895
            .| .:|.|..:.|...|  |.:|:.:  ....|.|. .:||||..|..|..:..|:..|.:...|
  Rat   801 TG-TVPSNLFILNDEEDCVRALFWLR--NNSTLTEG-KVIVYGNTLDAYTTVETLLHIGMEGNCI 861

  Fly   896 IYVQPHVPIVMEDLGIPEKDSRLDPIILEMIADLGVTIYLSTNYSQFILSQDNMNIEKVELIMHP 960
            .:|.|  |.......|...|  ::..:.|.::..||.:|.....:|:...||...|:..  ....
  Rat   862 YFVHP--PAESNTTYINNYD--IESAVDEALSAAGVKVYQDALLAQWNQGQDPDPIQNA--CFTT 920

  Fly   961 SKKKIVLHCDLFVNYNDNTISSSMENVLSEAGIEISERRIVVNSRYCTNDRNIFAAGINVIMIPK 1025
            |.|...|.|..|.::....:........::|.: :.:.|:|:::.:.|||..|.|||      |.
  Rat   921 STKPFRLECSAFFSFYKKNVDYETFKAFNDACL-VYDGRLVIDTTFHTNDIAIRAAG------PL 978

  Fly  1026 PNF-------QYTYG--SPQEMAEKLAYE-LNMIKVVMQ-------------SRYSKPYMFTGIL 1067
            ..|       ::|:.  |.:|:..:||.. |::....::             ..|....:..|||
  Rat   979 TKFSNRYYSNEWTHSNFSSKEIGFQLAAAMLSLFDPTLEPVTEPPADLDRLIPMYKGAKIQGGIL 1043

  Fly  1068 PMGYQIIKITQ---PKPLLIGQLPIEFSETLTTYD--DGDFCRIRLNNKLIVIEIVCVTKKP--- 1124
            |..|..:.|::   |.||.:.:...:|...:.|.:  .|.:.|:..||..:|..|.|.:|:|   
  Rat  1044 PGSYHYLHISKPAIPTPLDVQRSQPDFGSEIVTGNAKKGTYFRLYFNNYKLVEAITCFSKEPFPT 1108

  Fly  1125 ---KRLYFMEYFCGKHAMLLNDLRGRFQAGWIQNFLDFFQQPWTELLMHDRFEDLQLKNRRLLLS 1186
               .||:      |:|..:||:|..||....|.:...:|.:||...|.||||.||:.:.|:::.|
  Rat  1109 SNYIRLF------GQHEQVLNNLCTRFDEKLIPDLYSYFTEPWCMALFHDRFIDLKKELRQIITS 1167

  Fly  1187 MLLMNNKDTNNPRNSLENTQRLRLEENVID 1216
                 .::.:.|  ::|...| :|||..|:
  Rat  1168 -----KQEEDQP--TMEQIAR-QLEEEEIN 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30268NP_611712.2 DUF4821 14..286 CDD:292710 70/305 (23%)
Pyr_redox_2 <793..1017 CDD:285266 54/245 (22%)
Cfap61XP_008760507.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D120508at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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