DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58d and Obp58c

DIOPT Version :9

Sequence 1:NP_611711.1 Gene:Obp58d / 37609 FlyBaseID:FBgn0034770 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_611710.1 Gene:Obp58c / 37608 FlyBaseID:FBgn0034769 Length:199 Species:Drosophila melanogaster


Alignment Length:191 Identity:48/191 - (25%)
Similarity:77/191 - (40%) Gaps:34/191 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DNEETTAVAISSGDLTEDKCNTSRAGCCSELYIGEEEDLVK-CFVIHSPKLP-------VDGDAD 77
            |.|.|.|:       .||..:.    ||.  :.....||:: |....:..||       ||..||
  Fly    22 DCENTEAI-------NEDHIHY----CCK--HPDGHNDLIEGCARETNFTLPNQNEEALVDITAD 73

  Fly    78 IGKTLRFLSCFVECLYKQKKYIGKSDTINMKMVKLDAEKTFVDRPKEKDYHIAMFEFCRKDAVGV 142
              :.:|. :||.:|:: .|..:.|.:.::|..|:....:.|.|.|:.....|..|:.|...:...
  Fly    74 --RAIRG-TCFGKCVF-SKLNLMKDNNLDMDAVRSLFTERFPDDPEYAKEMINAFDHCHGKSEEN 134

  Fly   143 YNLLKASPGAKVLLKGACRPYLLMVFMC-ISDYHQKHECPYFRWEGTAKAGTKDMCENAKA 202
            .::..:.|..|.:.|..|.|...:|..| |..:.  |.||..||..|.:      ||:..|
  Fly   135 TSMFLSKPLFKQMSKQFCDPKSSVVLACVIRQFF--HNCPADRWSKTKE------CEDTLA 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58dNP_611711.1 None
Obp58cNP_611710.1 PBP_GOBP 47..135 CDD:299791 22/91 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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