DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58d and Obp50c

DIOPT Version :9

Sequence 1:NP_611711.1 Gene:Obp58d / 37609 FlyBaseID:FBgn0034770 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_725387.3 Gene:Obp50c / 246434 FlyBaseID:FBgn0050072 Length:185 Species:Drosophila melanogaster


Alignment Length:172 Identity:40/172 - (23%)
Similarity:66/172 - (38%) Gaps:30/172 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 AGC------CSELYIGEEEDLVK-CFVIHSPKLPVDG-DADIGKTL-----RFLSCFVECLYKQK 96
            |||      |:.   .::.::|| |.|.  |....|. .:..||.:     |...|..||::.:.
  Fly    16 AGCDPIDVDCTR---RQDFNIVKDCCVY--PTFRFDQFKSQCGKYMPVGAPRISPCLYECIFNKT 75

  Fly    97 KYIGKSDTINMKMVKLDAEKTFVDRPKEKDYHIAMFEFCRKDAVGVYNLLKASPGAKVLLKGACR 161
            ..: ....|:....:|..||.|.::..|:.|...:.. |......:.:..::.|..|.   ..|.
  Fly    76 NTV-VDGAIHPDNARLMLEKLFGNQDFEEAYFNGLMG-CSDSVQEMISNRRSRPQRKT---EQCS 135

  Fly   162 PYLLMVFMCISDYHQKHECPYFRWEGTAKAGTKDMCENAKAE 203
            |:.|...:|...|...| ||...|.||      :.||.|:.:
  Fly   136 PFSLFYGICAQRYVFNH-CPSSSWSGT------ESCEMARLQ 170



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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