DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58b and Obp47b

DIOPT Version :9

Sequence 1:NP_611709.1 Gene:Obp58b / 37607 FlyBaseID:FBgn0034768 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_610669.1 Gene:Obp47b / 36207 FlyBaseID:FBgn0033614 Length:199 Species:Drosophila melanogaster


Alignment Length:199 Identity:48/199 - (24%)
Similarity:84/199 - (42%) Gaps:18/199 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VICVIISLRLNGLVA---VRVHCRHMERIHEENIHHCCKHQDGHDDVTESCAKQTNFRLPSPN-E 67
            ::.:..||.||..:.   ..:.|:...::.:..:  ||| ..|.|.|.|.||::.   |.:.| :
  Fly     6 LLVIFASLALNTRLVFGQATIDCQRPPQLVDPAL--CCK-DGGRDQVAEQCAQRI---LGTANGQ 64

  Fly    68 EAIVDVTVDQAMVGTCWAKCVFDHYNLM-ENNTLDMDKVRSYYKRYHQTDPEYATEMLNAYEKCH 131
            :|....::|.|   .|.|:|:......: |...|::..:||........|..|...|..|:.||.
  Fly    65 KAGGPPSLDTA---ACLAECILTSSKYIDEPQKLNLANIRSDLSAKFSNDTLYVETMTMAFSKCE 126

  Fly   132 TQSEEATEKFL----SLPIVRAFSTAKFCKPTSSIIMSCVIYNFFHNCPASRWSNTTECVETLAF 192
            .||:......:    .:...:.......|.|.|:|::.|....:|.|||..||:...:|....|:
  Fly   127 PQSQRRLAMIMQQQQQVQQQKTQQQQPRCSPFSAIVLGCTYMEYFKNCPDHRWTPNAQCTLAKAY 191

  Fly   193 ARKC 196
            ..:|
  Fly   192 VTQC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58bNP_611709.1 PBP_GOBP 52..154 CDD:299791 23/107 (21%)
Obp47bNP_610669.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472876
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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