DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58b and Obp50d

DIOPT Version :9

Sequence 1:NP_611709.1 Gene:Obp58b / 37607 FlyBaseID:FBgn0034768 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_725388.2 Gene:Obp50d / 246436 FlyBaseID:FBgn0050074 Length:173 Species:Drosophila melanogaster


Alignment Length:160 Identity:40/160 - (25%)
Similarity:62/160 - (38%) Gaps:22/160 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DVT--ESCAKQTNFRLPSPNEEAIVDVTVDQAMVGTCWAKCVFDHYNLMENNTLDMDKVRSYYKR 111
            |||  .:|.|..|....|.|.:. ....|:...:..|..:|:|...|.:....|.|:.:....|.
  Fly    27 DVTALRNCCKLPNLDFSSFNSKC-SQYLVNGVHISPCSFECIFRAANALNGTHLVMENIEKMMKT 90

  Fly   112 YHQTDPEYATEMLNAYEKCHTQSEEATEKFL-------SLPIVRAFSTAKFCKPTSSIIMSCVIY 169
            ...:| |:....|:.:..|..|     ||.|       .:||     |.| |...:.:...|...
  Fly    91 ILGSD-EFVHVYLDGFRSCGNQ-----EKVLIKAMKRRRVPI-----TGK-CGSMAIMYGLCAHR 143

  Fly   170 NFFHNCPASRWSNTTECVETLAFARKCKDV 199
            ..:.|||.|.||.:..|.|...::.:|.|:
  Fly   144 YVYRNCPESVWSKSATCNEAREYSIRCDDM 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58bNP_611709.1 PBP_GOBP 52..154 CDD:299791 24/108 (22%)
Obp50dNP_725388.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472883
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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