DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58b and Obp50b

DIOPT Version :9

Sequence 1:NP_611709.1 Gene:Obp58b / 37607 FlyBaseID:FBgn0034768 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_725386.1 Gene:Obp50b / 246435 FlyBaseID:FBgn0050073 Length:238 Species:Drosophila melanogaster


Alignment Length:123 Identity:29/123 - (23%)
Similarity:45/123 - (36%) Gaps:27/123 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GTCWAKCVFDHYNLMENNTLDMDK----------VRSYYKRYHQTDPEYATEMLNAYEKCHTQSE 135
            |.|..:|::.|::|     ||.|.          :.|.|...:..| :|......|:|.|.....
  Fly    66 GPCRYECLYRHWDL-----LDQDNKIKKPELYLMITSLYSPLNGYD-KYGAAFKAAHETCEALGS 124

  Fly   136 EATEKFLSL-------PIVRAFSTAKFCKPTSSIIMSCVIYNFFHNCPASRWSNTTEC 186
            ...: ||.|       .:..|.||   |.|.:.:...|.:.....|||...|.:..:|
  Fly   125 RHAD-FLLLYSNQVADKMGMASST---CLPYAMLHAQCTMVYLTANCPRENWIDDPKC 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58bNP_611709.1 PBP_GOBP 52..154 CDD:299791 21/89 (24%)
Obp50bNP_725386.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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