DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58b and Obp50a

DIOPT Version :9

Sequence 1:NP_611709.1 Gene:Obp58b / 37607 FlyBaseID:FBgn0034768 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_995832.1 Gene:Obp50a / 246432 FlyBaseID:FBgn0050067 Length:200 Species:Drosophila melanogaster


Alignment Length:202 Identity:50/202 - (24%)
Similarity:78/202 - (38%) Gaps:21/202 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRIGFVICVIISLRLNGLVAVR-VHCRHMERIHEENIHHCCKHQDGHDDV-TESCAKQTNFRLPS 64
            :|.|.::..:|.|.|  ::..| ..||...: ..:|:|.||.....:..| ...|.|.......|
  Fly     1 MRTGRILVALIFLGL--IIPFRAAKCRAAPK-SVQNVHVCCSAPLPNWGVFNRECHKSAIQASVS 62

  Fly    65 PNEEAIVDVTVDQAMVGTCWAKCVFDHYNLMENNTLDMDKVRSYYKRYHQTDPEYATEMLNAYE- 128
            .|..:...|.:...:: .|...|.|:..::::.|.|...|||...:|....:|     .::||| 
  Fly    63 INRISKSKVNLANFLI-KCRLDCDFNASSVLQGNRLIQAKVRPMLERAFSNEP-----TIDAYES 121

  Fly   129 ---KCHTQSEEATEKFLSLPIVRAFSTAKFCKPTSSIIMSCVIYNFFHNCPASRWS-NTTECVET 189
               ||.|   ....|:..|..:...|.|  |...:.....|........||...|. |...|.|.
  Fly   122 NFAKCST---VVRSKYQELSPLSRQSDA--CDRHALFYSLCAYARLIFTCPDKMWQRNNRMCQEA 181

  Fly   190 LAFARKC 196
            .|:|:||
  Fly   182 KAYAKKC 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58bNP_611709.1 PBP_GOBP 52..154 CDD:299791 24/105 (23%)
Obp50aNP_995832.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472887
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21066
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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