DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30259 and Ccdc65

DIOPT Version :9

Sequence 1:NP_611708.2 Gene:CG30259 / 37606 FlyBaseID:FBgn0050259 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001014225.1 Gene:Ccdc65 / 362994 RGDID:1595842 Length:502 Species:Rattus norvegicus


Alignment Length:508 Identity:140/508 - (27%)
Similarity:263/508 - (51%) Gaps:50/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KGKGNKLANMSEEERARYLQMRADMEEETRRRKMQLISMYMKNKLKREDAFGRLNMAKINQEWRS 70
            |||..||. :::||:....|.:...:||..::|.:|::.::|:||.:|:....||:.|||.:||:
  Rat     4 KGKKPKLP-LTDEEQLILFQQKLLADEEAAKKKERLLTQFLKDKLAKEEHNSSLNLNKINTQWRT 67

  Fly    71 ILRQVKIQELRREIVDVESFFQEALKRKDQVIHRLIAHIESTEDMYANLQQSHMENITRIVDTHR 135
            :||:||.:||.::|..:...|:..:..||.||..|...:...|:.||:..:.|:.|:.:::...|
  Rat    68 VLREVKTRELHKDIEILSQIFERVVDCKDSVIKSLARDLTEAEEQYAHALRGHLHNVDQLLTLQR 132

  Fly   136 DRIEFFRTIYEDDKQAVLSQWEQDSAAFKEMHAQKQQQLECVFYQLEENTDGGIRDNHERFLDRC 200
            .|:......|..:.:.:..::|.:..|..:.|.::...|..||..:|:|......::...|....
  Rat   133 RRLSLLEENYNMELEVLTKEFETERKAILDHHDKEIHYLHDVFMAMEQNYVDSEYESKLEFQSMW 197

  Fly   201 EDLKSG-------MQLQLEQITSRGEARLEKLWQEYQGVLAGYCQHIEGFYSEYVDLKQRDEEAA 258
            :|||:.       ::||||.:       :|.||:.:|..|..|....|.....:..||.:||:::
  Rat   198 DDLKNKNLEEKHFLRLQLENV-------VEDLWRRFQDALKNYTDATEDRKIAFETLKVKDEKSS 255

  Fly   259 LQISQQTHEIEHLVDQLTNL--RLVSEEFYIKQQGQLEQRQAI---KQQLTERLRELRTCVEQEV 318
            .:|..|..:|:.|.:.::.|  ::|:.    .::|:. |.|.|   |:.:..:||:|:  :::..
  Rat   256 KEIEVQMKKIQRLQEAISALKGKIVAH----SREGEW-QNQCIRNDKELVHVQLRKLK--IQRTQ 313

  Fly   319 AR---DHQLFKLMSVESYHALEFLQETVAKGETLAQLSAVCAKMETQRERMFQLPEISKEII--E 378
            ||   ...|.|| ::||...|:.|::.|.|||.:.:|:.:|.|.||:.|::  ||..|..:.  |
  Rat   314 ARTESQENLVKL-TLESNATLKALKKVVEKGEKILKLAEICRKFETEEEKV--LPFYSSALTPEE 375

  Fly   379 IRDIEDQGNGSLTDPATDLLKDEVAVVPQMESFWRRVNNVAVDVACLKQQKRRLEAENSQLKTQL 443
            ..::|.|....:|:....::.|.:.    ||:||:|.|.|.::|..|:.::.:|...:|:|:..|
  Rat   376 QEEVEIQSQEEITEDLAKIMMDYLG----MENFWKRYNKVKLEVLSLQHRRLQLLDISSKLREML 436

  Fly   444 QDYLVNLNIANGSNSHVHSYLARRPKSMSVDRVSRL-QLQPKLVKSAQPTGRR 495
            :.||..:::::       ..|:|......|:..|.| ||.|   .:|||.|.|
  Rat   437 KQYLDGISVSD-------EVLSRLNPLFIVNHKSNLPQLPP---SAAQPGGDR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30259NP_611708.2 NYD-SP28 27..127 CDD:291438 32/99 (32%)
Ccdc65NP_001014225.1 NYD-SP28 27..124 CDD:291438 32/96 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341738
Domainoid 1 1.000 108 1.000 Domainoid score I6323
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13226
Inparanoid 1 1.050 187 1.000 Inparanoid score I3824
OMA 1 1.010 - - QHG56357
OrthoDB 1 1.010 - - D360596at33208
OrthoFinder 1 1.000 - - FOG0008356
OrthoInspector 1 1.000 - - oto97266
orthoMCL 1 0.900 - - OOG6_103739
Panther 1 1.100 - - O PTHR21625
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6336
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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