Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011508323.1 | Gene: | NECTIN4 / 81607 | HGNCID: | 19688 | Length: | 511 | Species: | Homo sapiens |
Alignment Length: | 440 | Identity: | 103/440 - (23%) |
---|---|---|---|
Similarity: | 152/440 - (34%) | Gaps: | 142/440 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 SRSSRMWLLPAWLLLVLVASN---GLPAVRGQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEP 85
Fly 86 TIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQI 150
Fly 151 AVLRDDF--RVEPK-DTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 212
Fly 213 VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMKEP-----KDQVMLYGQTA 272
Fly 273 TFHCSVGGDPPPKVLWKKEEGNIPVSRARILHDEKSLEIS--NITPT---DEGTYVC-EAHNNVG 331
Fly 332 QISARASLIVHAPPNFTKRPSNK--------KVGLNGVVQLPCMASGNPPPSVFWTK-EGVSTLM 387
Fly 388 FPNSSHGRQHVAADG-TLQITDVRQEDEGYYVC---SAFSVVDSS-TVRV 432 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 14/94 (15%) |
I-set | 56..150 | CDD:254352 | 14/93 (15%) | ||
I-set | 157..251 | CDD:254352 | 18/96 (19%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 18/92 (20%) | ||
I-set | 255..341 | CDD:254352 | 21/96 (22%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 16/74 (22%) | ||
IG_like | 351..436 | CDD:214653 | 31/96 (32%) | ||
Ig | 362..444 | CDD:299845 | 28/77 (36%) | ||
I-set | 445..531 | CDD:254352 | |||
IGc2 | 459..521 | CDD:197706 | |||
FN3 | 549..637 | CDD:238020 | |||
FN3 | 673..762 | CDD:238020 | |||
fn3 | 770..855 | CDD:278470 | |||
NECTIN4 | XP_011508323.1 | IG_like | 37..145 | CDD:214653 | 34/197 (17%) |
Ig1_Nectin-4_like | 46..146 | CDD:143296 | 33/183 (18%) | ||
Ig2_Nectin-3-4_like | 149..242 | CDD:143328 | 22/98 (22%) | ||
IG_like | 259..332 | CDD:214653 | 29/83 (35%) | ||
IGc2 | 268..320 | CDD:197706 | 21/61 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |