Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021337127.1 | Gene: | robo2 / 60309 | ZFINID: | ZDB-GENE-001019-1 | Length: | 1595 | Species: | Danio rerio |
Alignment Length: | 1655 | Identity: | 477/1655 - (28%) |
---|---|---|---|
Similarity: | 710/1655 - (42%) | Gaps: | 397/1655 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 NPSRSRSSRMWLLPAWLLLV----LVASNGLPA------VRGQYQSPRIIEHPTDLVVKKNEPAT 74
Fly 75 LNCKVEGKPEPTIEWFKDGEPVST--NEKKSHRVQFKDGALFFYRTMQGKKEQ-DGGEYWCVAKN 136
Fly 137 RVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKA 201
Fly 202 MSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMKEPKDQVM 266
Fly 267 LYGQTATFHCSVGGDPPPKVLWKKEEGNIPVSR--ARILHDEKSLEISNITPTDEGTYVCEAHNN 329
Fly 330 VGQISARASLIVH----APPNFTKRPSNKKVGLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFPN 390
Fly 391 ---SSHGRQHVAADGTLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQVSS-LDERPPPIIQIGP 451
Fly 452 ANQTLPKGSVATLPCRATGNPSPRIKWFHDGHAVQAGN-RYSIIQGSSLRVDDLQLSDSGTYTCT 515
Fly 516 ASGERGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPGAVG 580
Fly 581 --PIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYVFLVRAENTQGISVPSGLSNTI 643
Fly 644 KTIEADFDAASANDLSAARTLLTGK-SVELIDASAINASAVRLEWMLHVSADEKYVEGLRIHYKD 707
Fly 708 ---ASVPSAQYHSITVMDASAESFVVGNLKKYTKYEFFLTPFFETIEGQPSNSKTALTYEDVPSA 769
Fly 770 PPDNI---QIGMYNQTAGWVRWTPPPSQHHNGNLYGYKIEVSAGNTMKVLANMTLNATTTSVLLN 831
Fly 832 NLTTGAVYSVRLNSFTKAGDGPYSKPISLFMDPTHHVHPPRAHPSGTHDGRHEGQDLTYHNNGNI 896
Fly 897 PPGDINPTTHKKTTDYLSGPWLMVLVCIVLLVLVISAAISMVYFKRKHQMTKELGHLSVVSDNEI 961
Fly 962 TALNINSKESLWIDHHRGWRTADTDKDSGL-SESKLLSHVNSSQSNY-------------NNSDG 1012
Fly 1013 GTD---------------------------YAEVDTRNLTTFYNCRKSP-DNPTPYATTMIIGTS 1049
Fly 1050 S--------------------------------SETCTKTTSISAD----------------KDS 1066
Fly 1067 GTHSPYSDA------FAGQVPAVPVVKSNYLQYPVEPINWSEF-LPPPPEHPPPSSTYG-YAQGS 1123
Fly 1124 PESSRKSSKSAGSGISTNQSILNASIHSSSSGGFSAWGVSPQYAVACPP-ENVYSNPLSAVAGGT 1187
Fly 1188 QNRYQITPT---------------------------------NQHPPQLPA----YFATT----- 1210
Fly 1211 -----------------------------------------------GPGGAVPPNHLPFATQRH 1228
Fly 1229 AASEYQAGLNAARCAQSRAC--------------------------------------------- 1248
Fly 1249 -------------------NSCDALA--TPSPMQPPP--PVPVPEGWYQPVHPNSHPMHPTSSNH 1290
Fly 1291 Q------IYQCSSECSDHSRSSQSHKRQLQLEEHGSSAKQRGGHHRR---RAPVVQPCMESENEN 1346
Fly 1347 MLAEYEQRQYTSDCCNSSREGDTCSCSEGS 1376 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 55/97 (57%) |
I-set | 56..150 | CDD:254352 | 55/96 (57%) | ||
I-set | 157..251 | CDD:254352 | 42/93 (45%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 40/91 (44%) | ||
I-set | 255..341 | CDD:254352 | 35/87 (40%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 29/70 (41%) | ||
IG_like | 351..436 | CDD:214653 | 34/87 (39%) | ||
Ig | 362..444 | CDD:299845 | 35/85 (41%) | ||
I-set | 445..531 | CDD:254352 | 44/86 (51%) | ||
IGc2 | 459..521 | CDD:197706 | 27/62 (44%) | ||
FN3 | 549..637 | CDD:238020 | 37/89 (42%) | ||
FN3 | 673..762 | CDD:238020 | 24/91 (26%) | ||
fn3 | 770..855 | CDD:278470 | 30/87 (34%) | ||
robo2 | XP_021337127.1 | Ig1_Robo | 49..148 | CDD:143317 | 55/98 (56%) |
Ig | 156..240 | CDD:325142 | 40/91 (44%) | ||
I-set | 244..332 | CDD:254352 | 35/87 (40%) | ||
Ig4_Robo | 354..443 | CDD:143203 | 35/88 (40%) | ||
IG | 450..531 | CDD:214652 | 40/80 (50%) | ||
FN3 | 549..642 | CDD:238020 | 40/97 (41%) | ||
FN3 | 673..758 | CDD:238020 | 24/87 (28%) | ||
FN3 | 767..859 | CDD:238020 | 31/92 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 81 | 1.000 | Domainoid score | I8418 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H43188 | |
Inparanoid | 1 | 1.050 | 622 | 1.000 | Inparanoid score | I848 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6572 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 1 | 1.100 | - | - | O | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3358 |
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.990 |