Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097508.2 | Gene: | DIP-delta / 5740816 | FlyBaseID: | FBgn0085420 | Length: | 469 | Species: | Drosophila melanogaster |
Alignment Length: | 498 | Identity: | 110/498 - (22%) |
---|---|---|---|
Similarity: | 171/498 - (34%) | Gaps: | 147/498 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 234 IAQNLVGTRESS--------YAKLIVQV---KPYFMKEPKDQVMLYGQTATFHCSV---GGDPPP 284
Fly 285 KVLWKKEEGNIPVSRARIL----HDEKSLEISNITPT--------------DEGTYVCEAHNNVG 331
Fly 332 QISARASLIVHAPPN---FTKRPSNKKVGLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFPNSSH 393
Fly 394 GRQHVAADG-TLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQVSSLDERPPPIIQIGPANQTL- 456
Fly 457 -PKGSVATLPCRATGNPSPRIKWFHDGHAVQAGNRY-------SIIQGSSLRVDDLQLSDSGTYT 513
Fly 514 CTASGERGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPGA 578
Fly 579 VGPIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYVFLVRAENTQGISVPSGLSNTI 643
Fly 644 KTIEADFDAASANDL---SAARTLLTGKSVELIDASAINASAV 683 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | |
I-set | 56..150 | CDD:254352 | |||
I-set | 157..251 | CDD:254352 | 5/24 (21%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 5/24 (21%) | ||
I-set | 255..341 | CDD:254352 | 27/106 (25%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 24/89 (27%) | ||
IG_like | 351..436 | CDD:214653 | 21/85 (25%) | ||
Ig | 362..444 | CDD:299845 | 19/82 (23%) | ||
I-set | 445..531 | CDD:254352 | 24/94 (26%) | ||
IGc2 | 459..521 | CDD:197706 | 16/68 (24%) | ||
FN3 | 549..637 | CDD:238020 | 5/87 (6%) | ||
FN3 | 673..762 | CDD:238020 | 3/11 (27%) | ||
fn3 | 770..855 | CDD:278470 | |||
DIP-delta | NP_001097508.2 | IG | 51..143 | CDD:214652 | 26/101 (26%) |
Ig | 145..238 | CDD:416386 | 24/99 (24%) | ||
Ig strand A | 145..149 | CDD:409353 | 2/3 (67%) | ||
Ig strand A' | 154..159 | CDD:409353 | 2/4 (50%) | ||
Ig strand B | 165..172 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 178..183 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 185..187 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 195..199 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 203..209 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 216..223 | CDD:409353 | 3/6 (50%) | ||
Ig strand G | 230..238 | CDD:409353 | 1/11 (9%) | ||
Ig | 242..333 | CDD:416386 | 26/102 (25%) | ||
Ig strand A' | 250..253 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 259..266 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 272..277 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 281..283 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 289..293 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 295..305 | CDD:409353 | 2/9 (22%) | ||
Ig strand F | 314..322 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 325..334 | CDD:409353 | 5/18 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |