Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
Alignment Length: | 1549 | Identity: | 466/1549 - (30%) |
---|---|---|---|
Similarity: | 707/1549 - (45%) | Gaps: | 339/1549 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 SRMWLLPAWLLLVLVASNGLP---AVRGQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIE 88
Fly 89 WFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVL 153
Fly 154 RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNL 218
Fly 219 LISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMKEPKDQVMLYGQTATFHCSVGGDPP 283
Fly 284 PKVLWKK--EEGNIPVSRARILHDEKSLEISNITPTDEGTYVCEAHNNVGQISARASLIVHAPPN 346
Fly 347 FTKRPSNKKVGLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFPNSSHGRQHVA----ADGTLQIT 407
Fly 408 DVRQEDEGYYV-CSAFSVVDSSTVRVFLQVSSLDERPPPIIQIGPANQTLPKGSVATLPCRATGN 471
Fly 472 PSPRIKWFHDGHA--VQAGNRYSIIQGSSLRVDDLQL-SDSGTYTCTASGERGETSWAATLTVEK 533
Fly 534 PGSTSL--HRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPGAVGPIIGYTVEYFSPDLQT 596
Fly 597 GWIVAAQRVGDTQVTISGLTPGTSYVFLVRAENTQGISVPSGLSNTIKTIEADFDAASANDLSAA 661
Fly 662 R-TLLTGKSVELIDASAINASAVRLEWMLHVSADEKYVEGLRIHYKDASVP-------------- 711
Fly 712 ----------------------------------------------SAQYHSITVMD-ASAESFV 729
Fly 730 VGNLKKYTKYEFFLTPFFETIEGQPSNSKTALTYEDVPSAPPDNIQIGMYNQTAGWVRWTPPPSQ 794
Fly 795 HHNGNLYGYKIEV----SAGNTMKVLANMTLNATTTSVLLNNLTTGAVYSVRLNSFTKAGDGPYS 855
Fly 856 KPISLFMDP-THHVHPPRAHPSGTHDGRHEGQDLTYHNNGNIPPGDIN---PTTHKKTTDYLSGP 916
Fly 917 WLMVLVCIVLLVLVISAAISMVYFKRKHQMTKELGHLSVVSDN------EITALNINSKESLWID 975
Fly 976 HHRG---WR------TADTDKD-----------------------------SGLSESKLLSHVNS 1002
Fly 1003 SQSN-------YNNSDGGTDYAEVDTRNLTTFYNCRKSPDNPTPYATTMIIGTSSSETCTKTTSI 1060
Fly 1061 SADKDSGTHSPYSDAFAGQ-------VPAVPVVKSNYLQYPVEP--------------------- 1097
Fly 1098 INWSEFLPP--------------PPEHPPPSSTYGYAQGSPESSRKSSKSAGSGISTNQSILNAS 1148
Fly 1149 IHSSSSGGFSAWGVSPQYAVA----CPPENVYSNPLSAVAGGTQNRYQITPTNQHPPQLPAY--- 1206
Fly 1207 --------FATTGPGGAVPPNHLPFATQ-RHAASEYQAGLNAARCAQSRACNSCDALATPSPMQP 1262
Fly 1263 PPP-----VPVPEGWYQPVHPNSHPMHPTSSNHQIY-------------QCSSECSD--HSRSSQ 1307
Fly 1308 SHKRQLQLEEHGSSAKQRGGHHRRRAPVVQPCM--ESENENMLAEYEQRQYTSD 1359 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 50/94 (53%) |
I-set | 56..150 | CDD:254352 | 49/93 (53%) | ||
I-set | 157..251 | CDD:254352 | 46/93 (49%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 44/91 (48%) | ||
I-set | 255..341 | CDD:254352 | 35/87 (40%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 31/70 (44%) | ||
IG_like | 351..436 | CDD:214653 | 29/89 (33%) | ||
Ig | 362..444 | CDD:299845 | 28/86 (33%) | ||
I-set | 445..531 | CDD:254352 | 39/88 (44%) | ||
IGc2 | 459..521 | CDD:197706 | 25/64 (39%) | ||
FN3 | 549..637 | CDD:238020 | 33/87 (38%) | ||
FN3 | 673..762 | CDD:238020 | 30/149 (20%) | ||
fn3 | 770..855 | CDD:278470 | 26/88 (30%) | ||
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 50/95 (53%) |
I-set | 91..184 | CDD:254352 | 49/93 (53%) | ||
I-set | 190..279 | CDD:254352 | 46/94 (49%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 44/91 (48%) | ||
I-set | 283..370 | CDD:254352 | 35/87 (40%) | ||
Ig | 300..370 | CDD:299845 | 31/70 (44%) | ||
Ig | 388..>457 | CDD:299845 | 23/68 (34%) | ||
I-set | 479..561 | CDD:254352 | 36/81 (44%) | ||
Ig | 496..561 | CDD:143165 | 25/64 (39%) | ||
FN3 | 588..681 | CDD:238020 | 36/94 (38%) | ||
FN3 | <817..856 | CDD:238020 | 18/38 (47%) | ||
fn3 | 864..952 | CDD:278470 | 25/87 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6635 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D173520at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 1 | 1.100 | - | - | P | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
7 | 6.920 |