Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651649.1 | Gene: | DIP-gamma / 43417 | FlyBaseID: | FBgn0039617 | Length: | 413 | Species: | Drosophila melanogaster |
Alignment Length: | 445 | Identity: | 102/445 - (22%) |
---|---|---|---|
Similarity: | 162/445 - (36%) | Gaps: | 142/445 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 304 HDEKSLEISNITPTDEGT-YVCEAHNNVGQISARASLIVHAPPNFTKRPSNKKVGLNGVVQLPCM 367
Fly 368 ASGNPPPSVFWTKEGVSTLMFPNSSHGR--QHVAADGT---------LQITDVRQEDEGYYVCSA 421
Fly 422 FSVVDSSTVRVFLQVSSLDERPPP--IIQIGPANQTLPKGSVATLPCRATGNPSPRIKW-FHDGH 483
Fly 484 AV---QAGNR----YSIIQGSSLRVDDLQLSDSGTYTCTASGERGETSWAATLTVEKPGSTSLHR 541
Fly 542 AADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPG-AVGPIIGYTVEY-----FSPDLQTGWIV 600
Fly 601 AAQRV-GDTQVTISGLTPGT----------SYVFLVRAENTQGISV-------PSGLSNTIKTIE 647
Fly 648 ADFDAASANDLSAARTLLTGKSVEL-IDASAINASAVRLEWMLHVSADEKYVEGL 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | |
I-set | 56..150 | CDD:254352 | |||
I-set | 157..251 | CDD:254352 | |||
Ig2_Robo | 159..251 | CDD:143201 | |||
I-set | 255..341 | CDD:254352 | 10/37 (27%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 10/37 (27%) | ||
IG_like | 351..436 | CDD:214653 | 17/95 (18%) | ||
Ig | 362..444 | CDD:299845 | 17/92 (18%) | ||
I-set | 445..531 | CDD:254352 | 31/95 (33%) | ||
IGc2 | 459..521 | CDD:197706 | 28/69 (41%) | ||
FN3 | 549..637 | CDD:238020 | 22/111 (20%) | ||
FN3 | 673..762 | CDD:238020 | 8/29 (28%) | ||
fn3 | 770..855 | CDD:278470 | |||
DIP-gamma | NP_651649.1 | IG_like | 47..139 | CDD:214653 | 25/124 (20%) |
Ig | 47..129 | CDD:299845 | 22/112 (20%) | ||
Ig | 140..238 | CDD:299845 | 37/132 (28%) | ||
IG_like | 247..355 | CDD:214653 | 22/115 (19%) | ||
Ig | 256..351 | CDD:299845 | 19/102 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |