Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038944379.1 | Gene: | Cadm2 / 360687 | RGDID: | 1305678 | Length: | 444 | Species: | Rattus norvegicus |
Alignment Length: | 460 | Identity: | 107/460 - (23%) |
---|---|---|---|
Similarity: | 167/460 - (36%) | Gaps: | 98/460 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 269 GQTATFHCSVGGDPPPKVLW------------KKEEGNIPVSRARILHDEKSLEISNITPTDEGT 321
Fly 322 YVCEAHNNVGQISARASLIVHAPPNFTKRPS----NKKVGLNGVVQLPCMASGNPPPS-VFW--- 378
Fly 379 TKEGVSTLMFPNSSHGRQHVAADGTLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQVSSLDERP 443
Fly 444 PPIIQIGPANQTLPKGSVATLPCRATGNPSPR-IKWFHDGHAVQAGNRYSIIQGSSLRVDDLQLS 507
Fly 508 DSGTYTCTASGERGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVS-RTSISLRWAK 571
Fly 572 SQEKPGAVGPIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYV----------FLVR 626
Fly 627 AENTQGISVPSGLSNTIKTIEADFDAASANDLSAARTLLTGKSVELIDASAINASAVRLEWMLHV 691
Fly 692 SADEK 696 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | |
I-set | 56..150 | CDD:254352 | |||
I-set | 157..251 | CDD:254352 | |||
Ig2_Robo | 159..251 | CDD:143201 | |||
I-set | 255..341 | CDD:254352 | 20/83 (24%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 18/80 (23%) | ||
IG_like | 351..436 | CDD:214653 | 19/92 (21%) | ||
Ig | 362..444 | CDD:299845 | 20/85 (24%) | ||
I-set | 445..531 | CDD:254352 | 26/86 (30%) | ||
IGc2 | 459..521 | CDD:197706 | 20/62 (32%) | ||
FN3 | 549..637 | CDD:238020 | 17/98 (17%) | ||
FN3 | 673..762 | CDD:238020 | 8/24 (33%) | ||
fn3 | 770..855 | CDD:278470 | |||
Cadm2 | XP_038944379.1 | IgV_1_Necl-3 | 35..130 | CDD:409498 | 20/84 (24%) |
Ig strand B | 49..53 | CDD:409498 | 1/3 (33%) | ||
Ig strand C | 62..66 | CDD:409498 | 0/3 (0%) | ||
Ig strand E | 96..100 | CDD:409498 | 1/3 (33%) | ||
Ig strand F | 110..115 | CDD:409498 | 2/4 (50%) | ||
Ig strand G | 122..125 | CDD:409498 | 1/3 (33%) | ||
IgI_2_Necl-3 | 129..232 | CDD:409467 | 24/107 (22%) | ||
Ig strand B | 151..155 | CDD:409467 | 2/3 (67%) | ||
Ig strand C | 165..169 | CDD:409467 | 0/3 (0%) | ||
Ig strand E | 195..199 | CDD:409467 | 2/3 (67%) | ||
Ig strand F | 209..214 | CDD:409467 | 1/4 (25%) | ||
Ig strand G | 225..228 | CDD:409467 | 1/2 (50%) | ||
IGc2 | 249..312 | CDD:197706 | 20/63 (32%) | ||
Ig strand B | 251..260 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 266..272 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 275..278 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 281..286 | CDD:409353 | 1/5 (20%) | ||
Ig strand E | 287..294 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 301..309 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 312..322 | CDD:409353 | 3/9 (33%) | ||
4.1m | 397..415 | CDD:128590 | 5/24 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |