Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259218.1 | Gene: | DIP-alpha / 31322 | FlyBaseID: | FBgn0052791 | Length: | 554 | Species: | Drosophila melanogaster |
Alignment Length: | 331 | Identity: | 80/331 - (24%) |
---|---|---|---|
Similarity: | 132/331 - (39%) | Gaps: | 60/331 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 245 SYAKLIVQVKPYFMKEPKDQVMLYGQTATFHCSV---GGDPPPKVLWKKEE-------------G 293
Fly 294 NIPVSRARILHDEKSLEISNITPTDEGTYVCEAHNNVGQISARASLI-VHAPPNFTKRPSNKKVG 357
Fly 358 L--NGVVQLPCMASGNPPPSVFW---------TKEGVSTLMFPNSSHGRQHVAADGTLQITDVRQ 411
Fly 412 EDEGYYVCSAFS-VVDSSTVRVFLQVSSLDERPPPIIQIGPANQTL--PKGSVATLPCRATGNPS 473
Fly 474 PRIKWFHD-GHAVQAGNRYSIIQGS--------SLRVDDLQLSDSGTYTCTASGERGETSWAATL 529
Fly 530 TVEKPG 535 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | |
I-set | 56..150 | CDD:254352 | |||
I-set | 157..251 | CDD:254352 | 1/5 (20%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 1/5 (20%) | ||
I-set | 255..341 | CDD:254352 | 22/102 (22%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 19/85 (22%) | ||
IG_like | 351..436 | CDD:214653 | 24/96 (25%) | ||
Ig | 362..444 | CDD:299845 | 23/91 (25%) | ||
I-set | 445..531 | CDD:254352 | 25/96 (26%) | ||
IGc2 | 459..521 | CDD:197706 | 16/70 (23%) | ||
FN3 | 549..637 | CDD:238020 | |||
FN3 | 673..762 | CDD:238020 | |||
fn3 | 770..855 | CDD:278470 | |||
DIP-alpha | NP_001259218.1 | IG_like | 49..129 | CDD:214653 | 20/84 (24%) |
Ig | 51..131 | CDD:299845 | 20/84 (24%) | ||
I-set | 144..240 | CDD:254352 | 26/102 (25%) | ||
IGc2 | 159..228 | CDD:197706 | 19/75 (25%) | ||
Ig | 244..337 | CDD:299845 | 24/94 (26%) | ||
I-set | 244..337 | CDD:254352 | 24/94 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |