DRSC/TRiP Functional Genomics Resources

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Protein Alignment robo1 and ALCAM

DIOPT Version :9

Sequence 1:NP_476899.1 Gene:robo1 / 37603 FlyBaseID:FBgn0005631 Length:1395 Species:Drosophila melanogaster
Sequence 2:NP_001618.2 Gene:ALCAM / 214 HGNCID:400 Length:583 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo1NP_476899.1 Ig 56..151 CDD:299845
I-set 56..150 CDD:254352
I-set 157..251 CDD:254352
Ig2_Robo 159..251 CDD:143201
I-set 255..341 CDD:254352
Ig3_Robo 272..341 CDD:143202
IG_like 351..436 CDD:214653
Ig 362..444 CDD:299845
I-set 445..531 CDD:254352
IGc2 459..521 CDD:197706
FN3 549..637 CDD:238020
FN3 673..762 CDD:238020
fn3 770..855 CDD:278470
ALCAMNP_001618.2 Ig strand A' 29..33 CDD:409353
IGv 38..113 CDD:214650
Ig strand B 38..46 CDD:409353
CDR1 47..53 CDD:409353
FR2 54..60 CDD:409353
Ig strand C 55..60 CDD:409353
CDR2 61..78 CDD:409353
Ig strand C' 68..73 CDD:409353
Ig strand C' 75..79 CDD:409353
FR3 79..115 CDD:409353
Ig strand E 95..102 CDD:409353
Ig strand F 109..117 CDD:409353
Ig strand A 128..132 CDD:409353
C2-set_2 137..231 CDD:400489
Ig strand B 143..160 CDD:409353
Ig strand C 166..171 CDD:409353
Ig strand C' 175..179 CDD:409353
Ig strand D 187..190 CDD:409353
Ig strand E 199..207 CDD:409353
Ig strand F 217..224 CDD:409353
IG 255..329 CDD:214652
IG_like 339..393 CDD:214653
Ig strand C 363..367 CDD:409353
Ig strand F 389..393 CDD:409353
Ig_3 415..489 CDD:404760
Ig strand B 432..435 CDD:409353
Ig strand C 444..448 CDD:409353
Ig strand E 471..475 CDD:409353
Ig strand F 482..487 CDD:409353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..583
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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