Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001292144.1 | Gene: | Robo4 / 100911068 | RGDID: | 727947 | Length: | 1021 | Species: | Rattus norvegicus |
Alignment Length: | 1442 | Identity: | 275/1442 - (19%) |
---|---|---|---|
Similarity: | 434/1442 - (30%) | Gaps: | 600/1442 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 LLLVLVASNGLPAVRGQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNE 100
Fly 101 KKSHRVQFKDGALFFYRTMQGKKEQDG--------GEYWCVAKNRVGQAVSRHASLQIAVLRDDF 157
Fly 158 RVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISN 222
Fly 223 VEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMKEPKDQVMLYGQTATFHCSVGGDPPPKVL 287
Fly 288 WKKEEGNIPVSRARILHDEKSLEISNITPTDEGTYVCEAHNNVGQISARASLIVHAPPNFTKRPS 352
Fly 353 NKKVGLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFPNSSHGRQHVAADGTLQITDVRQEDEGYY 417
Fly 418 VCSAFSVVDSSTVRVFLQVSSLDERPPPIIQIGPANQTLPKGSVATLPCRATGNPSPRIKWFHDG 482
Fly 483 HAVQAGNRYSIIQGSSLRVDDLQLSDSGTYTCTASGERGETSWAATLTVEKPGSTSLHRAADPST 547
Fly 548 YPAPPGTPKVLNVSRTSISLRWAKSQEKPGAVGPIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTI 612
Fly 613 SGLTPGTSYVFLVRAENTQGISVPSGLSNTIKTIEADFDAASANDLSAARTLLTGKSVELIDASA 677
Fly 678 INASAVRLEWMLHVSADEKYVEGLRIHYKDASVPSAQYHSITVMDASAESFVVGNLKKYTKYEFF 742
Fly 743 LTPFFETIEGQPSNSKTALTYEDVPSAPPDNIQIGMYNQTAGWVRWTPPPSQHHNGNLYGYKIEV 807
Fly 808 SAGNTMKVLANMTLNATTTSVLLNNLTTGAVYSVRLNSFTKAGDGPYSKPISLFM---------D 863
Fly 864 PTHHVHPPRAHPSGTHDGRHEGQDLTYHNNGNIPPGDINPTTHKKTTDYLSGPWLMVLVCIVLLV 928
Fly 929 LVISAAISMVYFKRKHQMTKELGHLSVVSDNEITALNINSKESLWIDHHRGWRTADTDKDSGLSE 993
Fly 994 SKLLSHVNSSQSNYNNSDGGTDYAE-VDTRNLTTFYNCRKS-----PDNPTPYATTMIIGTSSSE 1052
Fly 1053 TCTKTTSISA----DKDSGTHSPY--SDAFAG--------------------------QVPAVPV 1085
Fly 1086 VKSNYLQYPVEPINW------SEFL---PPPPEHPP---PSSTYGYAQGSPESSRKSSKSAGSGI 1138
Fly 1139 -STNQSILNASIHSSSSGGFSAWGVSPQYAVACPPENVYSNPLSAVAGGTQNRYQITPTNQHPPQ 1202
Fly 1203 LP--AYFATTGPGGAVPPNHLPFATQRHAASEYQAGL----NAARCAQSRACNSCDALATP-SPM 1260
Fly 1261 QPPPPVPVPEGWYQPVHPNSHPMHPTSSNHQIYQCSSECSDHSRSSQSHKRQL------------ 1313
Fly 1314 QLEEHGSSAKQRGGHHRRRAPVVQPCMESENE-NMLAEYEQRQYTSDCCNSSREGDTCSCSEGSC 1377
Fly 1378 LYAEAGE-PAPR 1388 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 38/102 (37%) |
I-set | 56..150 | CDD:254352 | 38/101 (38%) | ||
I-set | 157..251 | CDD:254352 | 39/93 (42%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 37/91 (41%) | ||
I-set | 255..341 | CDD:254352 | 7/85 (8%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 4/68 (6%) | ||
IG_like | 351..436 | CDD:214653 | 7/84 (8%) | ||
Ig | 362..444 | CDD:299845 | 6/81 (7%) | ||
I-set | 445..531 | CDD:254352 | 6/85 (7%) | ||
IGc2 | 459..521 | CDD:197706 | 2/61 (3%) | ||
FN3 | 549..637 | CDD:238020 | 8/87 (9%) | ||
FN3 | 673..762 | CDD:238020 | 11/88 (13%) | ||
fn3 | 770..855 | CDD:278470 | 27/84 (32%) | ||
Robo4 | NP_001292144.1 | Ig | 41..144 | CDD:299845 | 38/103 (37%) |
I-set | 42..143 | CDD:254352 | 38/101 (38%) | ||
I-set | 150..231 | CDD:254352 | 38/88 (43%) | ||
Ig | 152..236 | CDD:299845 | 37/91 (41%) | ||
fn3 | 275..346 | CDD:278470 | 27/378 (7%) | ||
fn3 | 361..443 | CDD:278470 | 27/84 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 544..563 | 8/31 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 600..634 | 10/33 (30%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 726..810 | 19/107 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 81 | 1.000 | Domainoid score | I8282 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |