Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031752453.1 | Gene: | robo2 / 100493913 | XenbaseID: | XB-GENE-980527 | Length: | 1620 | Species: | Xenopus tropicalis |
Alignment Length: | 1404 | Identity: | 442/1404 - (31%) |
---|---|---|---|
Similarity: | 657/1404 - (46%) | Gaps: | 258/1404 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 MWLL----------PAWLLLVLVASNG-----LPAVRGQYQS-----------PRIIEHPTDLVV 67
Fly 68 KKNEPATLNCKVEGKPEPTIEWFKDGEPVST--NEKKSHRVQFKDGALFFYRTMQGKK-EQDGGE 129
Fly 130 YWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGV 194
Fly 195 PLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMK 259
Fly 260 EPKDQVMLYGQTATFHCSVGGDPPPKVLWKKEEGNIPVSRARILHDEKSLEISNITPTDEGTYVC 324
Fly 325 EAHNNVGQISARASLIVH----APPNFTKRPSNKKVGLNGVVQLPCMASGNPPPSVFWTKEGVST 385
Fly 386 LMFPN---SSHGRQHVAADGTLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQVSS-LDERPPPI 446
Fly 447 IQIGPANQTLPKGSVATLPCRATGNPSPRIKWFHDGHAVQAGN--RYSIIQGSSLRVDDLQLSDS 509
Fly 510 GTYTCTASGERGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQE 574
Fly 575 KPGAVG--PIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYVFLVRAENTQGISVPS 637
Fly 638 GLSNTIKTIEADFDAASANDLSAARTLLTGKSVELIDASAINASAVRLEWMLHVSADEKYVEGLR 702
Fly 703 IHYKDAS---VPSAQYHSITVMDASAESFVVGNLKKYTKYEFFLTPFFETIEGQPSNSKTALTYE 764
Fly 765 DVPSAPPDNI---QIGMYNQTAGWVRWTPPPSQHHNGNLYGYKIEVSAGNTMKVLANMTLNATTT 826
Fly 827 SVLLNNLTTGAVYSVRLNSFTKAGDGPYSKPISLFMDPTHHVHPPRAHPSGTHDGRHEGQDLTYH 891
Fly 892 NNGNIPPGDINPTTHKKTTDYLSGPWLMVLVCIVLLVLVISAAISMVYFKRKHQMTKELGHLSVV 956
Fly 957 S------DNEITALN----INSKESLW---IDHHRGWRTADTDKDSGL-SESKLLSHVNSSQSNY 1007
Fly 1008 --------------NNSDGGTD------------------------------YAEVDTRNLTTFY 1028
Fly 1029 NCRKSPDNPTPYATTMIIGTSSSETCTK-------TTSISADKD-SGTHSPYSDAFAGQVPAVPV 1085
Fly 1086 VKSNYLQYPVE-----------PINWSEFLPPPPEHPPPSSTYGYAQGSPESSRKSSKSAGSGIS 1139
Fly 1140 TNQSILNASIHSSSSGGFSAWGVSPQYAVACPPENVYSNPLSAVAGGTQNRYQITPTNQHPPQLP 1204
Fly 1205 AYFATTGPGGAVPPNHLPFATQRHAASEYQAGLNAAR--------CAQSRACN---SCDALATPS 1258
Fly 1259 P---MQPPPPVPVPE------------GWYQPVHPNSHP 1282 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 53/97 (55%) |
I-set | 56..150 | CDD:254352 | 53/96 (55%) | ||
I-set | 157..251 | CDD:254352 | 43/93 (46%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 41/91 (45%) | ||
I-set | 255..341 | CDD:254352 | 35/85 (41%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 29/68 (43%) | ||
IG_like | 351..436 | CDD:214653 | 34/87 (39%) | ||
Ig | 362..444 | CDD:299845 | 35/85 (41%) | ||
I-set | 445..531 | CDD:254352 | 40/87 (46%) | ||
IGc2 | 459..521 | CDD:197706 | 24/63 (38%) | ||
FN3 | 549..637 | CDD:238020 | 35/89 (39%) | ||
FN3 | 673..762 | CDD:238020 | 27/91 (30%) | ||
fn3 | 770..855 | CDD:278470 | 30/87 (34%) | ||
robo2 | XP_031752453.1 | IgC_1_Robo | 56..154 | CDD:409490 | 53/97 (55%) |
Ig strand B | 73..77 | CDD:409490 | 2/3 (67%) | ||
Ig strand C | 86..90 | CDD:409490 | 3/3 (100%) | ||
Ig strand E | 113..117 | CDD:409490 | 2/3 (67%) | ||
Ig strand F | 132..137 | CDD:409490 | 2/4 (50%) | ||
Ig strand G | 146..149 | CDD:409490 | 2/2 (100%) | ||
Ig | 161..246 | CDD:416386 | 42/92 (46%) | ||
Ig strand A | 161..164 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 166..170 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 174..181 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 189..194 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 196..199 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 205..209 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 211..217 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 224..232 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 235..246 | CDD:409353 | 5/10 (50%) | ||
Ig | 253..335 | CDD:416386 | 33/82 (40%) | ||
Ig strand A | 253..256 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 258..262 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 265..274 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 280..285 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 288..291 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 294..299 | CDD:409353 | 2/5 (40%) | ||
Ig strand E | 300..307 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 314..322 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 325..335 | CDD:409353 | 5/9 (56%) | ||
IgI_4_Robo | 344..441 | CDD:409391 | 37/96 (39%) | ||
Ig strand B | 360..364 | CDD:409391 | 1/3 (33%) | ||
Ig strand C | 373..377 | CDD:409391 | 2/3 (67%) | ||
Ig strand E | 403..407 | CDD:409391 | 2/3 (67%) | ||
Ig strand F | 417..422 | CDD:409391 | 3/4 (75%) | ||
Ig strand G | 430..433 | CDD:409391 | 0/2 (0%) | ||
IgI_5_Robo | 448..535 | CDD:409544 | 39/86 (45%) | ||
Ig strand B | 464..468 | CDD:409544 | 2/3 (67%) | ||
Ig strand C | 477..481 | CDD:409544 | 1/3 (33%) | ||
Ig strand E | 501..505 | CDD:409544 | 1/3 (33%) | ||
Ig strand F | 515..520 | CDD:409544 | 4/4 (100%) | ||
Ig strand G | 528..531 | CDD:409544 | 1/2 (50%) | ||
FN3 | 553..646 | CDD:238020 | 38/97 (39%) | ||
FN3 | 677..762 | CDD:238020 | 27/87 (31%) | ||
FN3 | 771..863 | CDD:238020 | 32/120 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 103 | 1.000 | Domainoid score | I6691 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H43188 | |
Inparanoid | 1 | 1.050 | 602 | 1.000 | Inparanoid score | I932 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9461 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.050 |